Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CNOT4O95628 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CNOT4O95628 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.01■□□□□ 0.31
CNOT4O95628 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNOT4O95628 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.01■□□□□ 0.31
CNOT4O95628 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CNOT4O95628 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.01■□□□□ 0.31
CNOT4O95628 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CNOT4O95628 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.01■□□□□ 0.31
CNOT4O95628 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.01■□□□□ 0.31
CNOT4O95628 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.01■□□□□ 0.31
CNOT4O95628 AP005242.2-201ENST00000580065 1175 ntBASIC17.01■□□□□ 0.31
CNOT4O95628 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 AP000692.2-201ENST00000608391 879 ntBASIC17.01■□□□□ 0.31
CNOT4O95628 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.01■□□□□ 0.31
CNOT4O95628 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.01■□□□□ 0.31
CNOT4O95628 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.01■□□□□ 0.31
CNOT4O95628 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNOT4O95628 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNOT4O95628 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNOT4O95628 AC007952.6-201ENST00000573168 2673 ntBASIC17.01■□□□□ 0.31
CNOT4O95628 AC003957.1-201ENST00000625108 2673 ntBASIC17.01■□□□□ 0.31
CNOT4O95628 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNOT4O95628 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNOT4O95628 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.01■□□□□ 0.31
CNOT4O95628 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17■□□□□ 0.31
CNOT4O95628 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17■□□□□ 0.31
CNOT4O95628 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17■□□□□ 0.31
CNOT4O95628 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CNOT4O95628 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 MMP23A-201ENST00000234610 1017 ntBASIC17■□□□□ 0.31
CNOT4O95628 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CNOT4O95628 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17■□□□□ 0.31
CNOT4O95628 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNOT4O95628 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17■□□□□ 0.31
CNOT4O95628 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 FITM1-202ENST00000559294 800 ntBASIC17■□□□□ 0.31
CNOT4O95628 RN7SL850P-201ENST00000579959 291 ntBASIC17■□□□□ 0.31
CNOT4O95628 AC011298.2-201ENST00000617989 482 ntBASIC17■□□□□ 0.31
CNOT4O95628 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CNOT4O95628 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17■□□□□ 0.31
CNOT4O95628 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17■□□□□ 0.31
CNOT4O95628 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17■□□□□ 0.31
CNOT4O95628 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNOT4O95628 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.99■□□□□ 0.31
CNOT4O95628 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CNOT4O95628 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CNOT4O95628 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.99■□□□□ 0.31
CNOT4O95628 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CNOT4O95628 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.99■□□□□ 0.31
CNOT4O95628 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.99■□□□□ 0.31
CNOT4O95628 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 ARMC10P1-201ENST00000313754 855 ntBASIC16.99■□□□□ 0.31
CNOT4O95628 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CNOT4O95628 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.99■□□□□ 0.31
CNOT4O95628 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.99■□□□□ 0.31
CNOT4O95628 AC011506.1-201ENST00000474329 610 ntBASIC16.99■□□□□ 0.31
CNOT4O95628 KRT18P35-201ENST00000510488 1269 ntBASIC16.99■□□□□ 0.31
CNOT4O95628 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.99■□□□□ 0.31
CNOT4O95628 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.99■□□□□ 0.31
CNOT4O95628 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.99■□□□□ 0.31
CNOT4O95628 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.99■□□□□ 0.31
CNOT4O95628 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.99■□□□□ 0.31
CNOT4O95628 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.99■□□□□ 0.31
CNOT4O95628 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
CNOT4O95628 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms