Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
LTN1O94822 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC25.44■■□□□ 1.66
LTN1O94822 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC25.44■■□□□ 1.66
LTN1O94822 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC25.44■■□□□ 1.66
LTN1O94822 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC25.44■■□□□ 1.66
LTN1O94822 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.43■■□□□ 1.66
LTN1O94822 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
LTN1O94822 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC25.43■■□□□ 1.66
LTN1O94822 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC25.43■■□□□ 1.66
LTN1O94822 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
LTN1O94822 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC25.43■■□□□ 1.66
LTN1O94822 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC25.43■■□□□ 1.66
LTN1O94822 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
LTN1O94822 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
LTN1O94822 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.42■■□□□ 1.66
LTN1O94822 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC25.42■■□□□ 1.66
LTN1O94822 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC25.42■■□□□ 1.66
LTN1O94822 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC25.42■■□□□ 1.66
LTN1O94822 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC25.42■■□□□ 1.66
LTN1O94822 IFNL4P1-201ENST00000607083 540 ntBASIC25.42■■□□□ 1.66
LTN1O94822 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC25.42■■□□□ 1.66
LTN1O94822 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC25.42■■□□□ 1.66
LTN1O94822 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
LTN1O94822 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LTN1O94822 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
LTN1O94822 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
LTN1O94822 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LTN1O94822 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LTN1O94822 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
LTN1O94822 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
LTN1O94822 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC25.41■■□□□ 1.66
LTN1O94822 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC25.41■■□□□ 1.66
LTN1O94822 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
LTN1O94822 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.41■■□□□ 1.66
LTN1O94822 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC25.41■■□□□ 1.66
LTN1O94822 HLA-F-220ENST00000434407 884 ntBASIC25.41■■□□□ 1.66
LTN1O94822 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC25.41■■□□□ 1.66
LTN1O94822 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
LTN1O94822 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC25.41■■□□□ 1.66
LTN1O94822 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
LTN1O94822 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
LTN1O94822 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
LTN1O94822 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
LTN1O94822 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
LTN1O94822 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC25.4■■□□□ 1.66
LTN1O94822 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
LTN1O94822 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
LTN1O94822 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
LTN1O94822 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
LTN1O94822 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC25.4■■□□□ 1.66
LTN1O94822 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
LTN1O94822 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
LTN1O94822 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
LTN1O94822 AL157888.1-201ENST00000631930 593 ntBASIC25.4■■□□□ 1.66
LTN1O94822 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
LTN1O94822 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC25.4■■□□□ 1.66
LTN1O94822 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
LTN1O94822 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
LTN1O94822 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
LTN1O94822 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
LTN1O94822 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
LTN1O94822 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LTN1O94822 ENSA-205ENST00000361532 792 ntTSL 2 BASIC25.39■■□□□ 1.66
LTN1O94822 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC25.39■■□□□ 1.66
LTN1O94822 TPM4P1-201ENST00000436100 807 ntBASIC25.39■■□□□ 1.66
LTN1O94822 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC25.39■■□□□ 1.66
LTN1O94822 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC25.39■■□□□ 1.66
LTN1O94822 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC25.39■■□□□ 1.66
LTN1O94822 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LTN1O94822 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LTN1O94822 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC25.39■■□□□ 1.66
LTN1O94822 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
LTN1O94822 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
LTN1O94822 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
LTN1O94822 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC25.39■■□□□ 1.65
LTN1O94822 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
LTN1O94822 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms