Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.13■□□□□ 0.81
BEST1O76090 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.13■□□□□ 0.81
BEST1O76090 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
BEST1O76090 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.13■□□□□ 0.81
BEST1O76090 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.13■□□□□ 0.81
BEST1O76090 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.13■□□□□ 0.81
BEST1O76090 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.13■□□□□ 0.81
BEST1O76090 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.13■□□□□ 0.81
BEST1O76090 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.13■□□□□ 0.81
BEST1O76090 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.13■□□□□ 0.81
BEST1O76090 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
BEST1O76090 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
BEST1O76090 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST1O76090 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.12■□□□□ 0.81
BEST1O76090 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
BEST1O76090 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.12■□□□□ 0.81
BEST1O76090 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
BEST1O76090 ECEL1P2-202ENST00000465689 757 ntBASIC20.12■□□□□ 0.81
BEST1O76090 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 EGLN1P1-201ENST00000531623 762 ntBASIC20.12■□□□□ 0.81
BEST1O76090 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.12■□□□□ 0.81
BEST1O76090 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.12■□□□□ 0.81
BEST1O76090 AL023803.3-201ENST00000615559 522 ntBASIC20.12■□□□□ 0.81
BEST1O76090 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
BEST1O76090 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BEST1O76090 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.12■□□□□ 0.81
BEST1O76090 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.12■□□□□ 0.81
BEST1O76090 AC005332.7-201ENST00000614046 2005 ntBASIC20.12■□□□□ 0.81
BEST1O76090 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
BEST1O76090 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
BEST1O76090 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.11■□□□□ 0.81
BEST1O76090 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST1O76090 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST1O76090 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST1O76090 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.11■□□□□ 0.81
BEST1O76090 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.11■□□□□ 0.81
BEST1O76090 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.11■□□□□ 0.81
BEST1O76090 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.11■□□□□ 0.81
BEST1O76090 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
BEST1O76090 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST1O76090 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.11■□□□□ 0.81
BEST1O76090 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST1O76090 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST1O76090 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
BEST1O76090 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.1■□□□□ 0.81
BEST1O76090 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
BEST1O76090 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
BEST1O76090 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.1■□□□□ 0.81
BEST1O76090 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
BEST1O76090 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 AC141586.3-201ENST00000562166 1838 ntBASIC20.1■□□□□ 0.81
BEST1O76090 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.1■□□□□ 0.81
BEST1O76090 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.1■□□□□ 0.81
BEST1O76090 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.1■□□□□ 0.81
BEST1O76090 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST1O76090 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.1■□□□□ 0.81
BEST1O76090 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.1■□□□□ 0.81
BEST1O76090 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms