Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GPC4O75487 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.18■□□□□ 0.66
GPC4O75487 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.18■□□□□ 0.66
GPC4O75487 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GPC4O75487 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.18■□□□□ 0.66
GPC4O75487 KRT18P29-201ENST00000397031 1267 ntBASIC19.18■□□□□ 0.66
GPC4O75487 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC4O75487 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC4O75487 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC4O75487 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC4O75487 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.18■□□□□ 0.66
GPC4O75487 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.18■□□□□ 0.66
GPC4O75487 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GPC4O75487 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.18■□□□□ 0.66
GPC4O75487 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC4O75487 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
GPC4O75487 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GPC4O75487 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
GPC4O75487 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC4O75487 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GPC4O75487 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GPC4O75487 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC4O75487 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
GPC4O75487 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GPC4O75487 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC4O75487 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 PRORSD1P-201ENST00000295112 541 ntBASIC19.17■□□□□ 0.66
GPC4O75487 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
GPC4O75487 KRASP1-201ENST00000407852 552 ntBASIC19.17■□□□□ 0.66
GPC4O75487 AC239809.2-201ENST00000415381 517 ntBASIC19.17■□□□□ 0.66
GPC4O75487 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC4O75487 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.17■□□□□ 0.66
GPC4O75487 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.17■□□□□ 0.66
GPC4O75487 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.17■□□□□ 0.66
GPC4O75487 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC4O75487 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC4O75487 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC4O75487 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC4O75487 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC4O75487 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
GPC4O75487 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC4O75487 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC4O75487 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GPC4O75487 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC4O75487 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GPC4O75487 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC4O75487 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC4O75487 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GPC4O75487 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC4O75487 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC4O75487 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC4O75487 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC4O75487 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GPC4O75487 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.16■□□□□ 0.66
GPC4O75487 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.16■□□□□ 0.66
GPC4O75487 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC4O75487 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
GPC4O75487 AL032819.2-201ENST00000624543 2162 ntBASIC19.16■□□□□ 0.66
GPC4O75487 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC4O75487 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC4O75487 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC4O75487 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.16■□□□□ 0.66
GPC4O75487 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC4O75487 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC4O75487 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
GPC4O75487 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
GPC4O75487 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC4O75487 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.15■□□□□ 0.66
GPC4O75487 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
GPC4O75487 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms