Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUPT3HO75486 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SUPT3HO75486 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUPT3HO75486 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.97■□□□□ 0.63
SUPT3HO75486 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SUPT3HO75486 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.97■□□□□ 0.63
SUPT3HO75486 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUPT3HO75486 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SUPT3HO75486 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SUPT3HO75486 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUPT3HO75486 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUPT3HO75486 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.96■□□□□ 0.63
SUPT3HO75486 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.96■□□□□ 0.63
SUPT3HO75486 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 AC093503.3-201ENST00000624917 2352 ntBASIC18.96■□□□□ 0.63
SUPT3HO75486 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SUPT3HO75486 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.96■□□□□ 0.63
SUPT3HO75486 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.96■□□□□ 0.63
SUPT3HO75486 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.96■□□□□ 0.63
SUPT3HO75486 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.96■□□□□ 0.63
SUPT3HO75486 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.96■□□□□ 0.63
SUPT3HO75486 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.96■□□□□ 0.63
SUPT3HO75486 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 SDHAP1-207ENST00000440850 2000 ntBASIC18.96■□□□□ 0.63
SUPT3HO75486 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.96■□□□□ 0.63
SUPT3HO75486 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.96■□□□□ 0.63
SUPT3HO75486 AC104417.2-201ENST00000562989 1793 ntBASIC18.96■□□□□ 0.63
SUPT3HO75486 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUPT3HO75486 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SUPT3HO75486 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SUPT3HO75486 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SUPT3HO75486 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SUPT3HO75486 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SUPT3HO75486 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SUPT3HO75486 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SUPT3HO75486 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SUPT3HO75486 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 TUBB8P6-201ENST00000436895 1288 ntBASIC18.95■□□□□ 0.62
SUPT3HO75486 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.95■□□□□ 0.62
SUPT3HO75486 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
SUPT3HO75486 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.95■□□□□ 0.62
SUPT3HO75486 KRT18P16-201ENST00000510337 1294 ntBASIC18.95■□□□□ 0.62
SUPT3HO75486 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.95■□□□□ 0.62
SUPT3HO75486 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.95■□□□□ 0.62
SUPT3HO75486 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.95■□□□□ 0.62
SUPT3HO75486 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.95■□□□□ 0.62
SUPT3HO75486 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.95■□□□□ 0.62
SUPT3HO75486 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 AL049812.1-201ENST00000432563 2267 ntBASIC18.95■□□□□ 0.62
SUPT3HO75486 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.95■□□□□ 0.62
SUPT3HO75486 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.95■□□□□ 0.62
SUPT3HO75486 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SUPT3HO75486 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SUPT3HO75486 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SUPT3HO75486 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.94■□□□□ 0.62
SUPT3HO75486 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.94■□□□□ 0.62
SUPT3HO75486 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.94■□□□□ 0.62
SUPT3HO75486 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.94■□□□□ 0.62
SUPT3HO75486 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.94■□□□□ 0.62
SUPT3HO75486 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.94■□□□□ 0.62
SUPT3HO75486 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SUPT3HO75486 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.94■□□□□ 0.62
SUPT3HO75486 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SUPT3HO75486 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUPT3HO75486 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms