Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM3O75382 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM3O75382 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TRIM3O75382 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRIM3O75382 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM3O75382 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM3O75382 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM3O75382 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM3O75382 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM3O75382 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRIM3O75382 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
TRIM3O75382 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM3O75382 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM3O75382 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM3O75382 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM3O75382 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM3O75382 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM3O75382 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 NIFKP9-201ENST00000419265 221 ntBASIC17.84■□□□□ 0.45
TRIM3O75382 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.84■□□□□ 0.45
TRIM3O75382 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM3O75382 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.84■□□□□ 0.45
TRIM3O75382 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRIM3O75382 CD177P1-201ENST00000606252 935 ntBASIC17.84■□□□□ 0.45
TRIM3O75382 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM3O75382 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM3O75382 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM3O75382 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM3O75382 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.83■□□□□ 0.45
TRIM3O75382 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM3O75382 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM3O75382 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM3O75382 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM3O75382 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM3O75382 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.83■□□□□ 0.45
TRIM3O75382 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM3O75382 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM3O75382 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM3O75382 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM3O75382 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM3O75382 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRIM3O75382 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.83■□□□□ 0.44
TRIM3O75382 KSR1P1-201ENST00000446298 240 ntBASIC17.83■□□□□ 0.44
TRIM3O75382 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM3O75382 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM3O75382 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM3O75382 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM3O75382 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM3O75382 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRIM3O75382 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM3O75382 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM3O75382 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM3O75382 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM3O75382 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRIM3O75382 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM3O75382 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TRIM3O75382 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
TRIM3O75382 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM3O75382 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRIM3O75382 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 KRT17P2-201ENST00000300992 1314 ntBASIC17.82■□□□□ 0.44
TRIM3O75382 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 FAM197Y1-201ENST00000421178 764 ntBASIC17.82■□□□□ 0.44
TRIM3O75382 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.82■□□□□ 0.44
TRIM3O75382 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM3O75382 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM3O75382 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms