Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 CRYGFP-201ENST00000418459 633 ntBASIC18.41■□□□□ 0.54
PRICKLE3O43900 MFAP1P1-201ENST00000442257 1255 ntBASIC18.41■□□□□ 0.54
PRICKLE3O43900 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.41■□□□□ 0.54
PRICKLE3O43900 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PRICKLE3O43900 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.41■□□□□ 0.54
PRICKLE3O43900 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.41■□□□□ 0.54
PRICKLE3O43900 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE3O43900 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE3O43900 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE3O43900 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE3O43900 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE3O43900 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE3O43900 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE3O43900 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 AC073912.3-201ENST00000624414 853 ntBASIC18.4■□□□□ 0.54
PRICKLE3O43900 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.4■□□□□ 0.54
PRICKLE3O43900 CYP2D8P-201ENST00000433633 1490 ntBASIC18.39■□□□□ 0.54
PRICKLE3O43900 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
PRICKLE3O43900 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRICKLE3O43900 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRICKLE3O43900 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 MIR1224-201ENST00000408193 85 ntBASIC18.39■□□□□ 0.53
PRICKLE3O43900 AC087499.1-201ENST00000418141 1075 ntBASIC18.39■□□□□ 0.53
PRICKLE3O43900 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.39■□□□□ 0.53
PRICKLE3O43900 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE3O43900 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE3O43900 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PRICKLE3O43900 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE3O43900 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.38■□□□□ 0.53
PRICKLE3O43900 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE3O43900 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
PRICKLE3O43900 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE3O43900 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE3O43900 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE3O43900 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.38■□□□□ 0.53
PRICKLE3O43900 AC010947.1-201ENST00000623454 693 ntBASIC18.38■□□□□ 0.53
PRICKLE3O43900 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE3O43900 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE3O43900 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE3O43900 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE3O43900 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE3O43900 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE3O43900 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE3O43900 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PRICKLE3O43900 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms