Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PROM1O43490 AC141586.3-201ENST00000562166 1838 ntBASIC18.19■□□□□ 0.5
PROM1O43490 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.18■□□□□ 0.5
PROM1O43490 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
PROM1O43490 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 AL135905.2-201ENST00000584934 1404 ntBASIC18.18■□□□□ 0.5
PROM1O43490 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PROM1O43490 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.18■□□□□ 0.5
PROM1O43490 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.18■□□□□ 0.5
PROM1O43490 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PROM1O43490 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.18■□□□□ 0.5
PROM1O43490 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.18■□□□□ 0.5
PROM1O43490 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.18■□□□□ 0.5
PROM1O43490 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.18■□□□□ 0.5
PROM1O43490 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.18■□□□□ 0.5
PROM1O43490 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PROM1O43490 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.18■□□□□ 0.5
PROM1O43490 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.18■□□□□ 0.5
PROM1O43490 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM1O43490 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.17■□□□□ 0.5
PROM1O43490 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.17■□□□□ 0.5
PROM1O43490 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PROM1O43490 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.17■□□□□ 0.5
PROM1O43490 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PROM1O43490 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.17■□□□□ 0.5
PROM1O43490 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PROM1O43490 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 AC073195.1-201ENST00000607241 877 ntBASIC18.17■□□□□ 0.5
PROM1O43490 AC131212.4-201ENST00000623606 975 ntBASIC18.17■□□□□ 0.5
PROM1O43490 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.17■□□□□ 0.5
PROM1O43490 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PROM1O43490 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.17■□□□□ 0.5
PROM1O43490 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PROM1O43490 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM1O43490 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PROM1O43490 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.16■□□□□ 0.5
PROM1O43490 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.16■□□□□ 0.5
PROM1O43490 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 AC004980.1-204ENST00000429707 299 ntBASIC18.16■□□□□ 0.5
PROM1O43490 Z85996.1-201ENST00000494644 937 ntBASIC18.16■□□□□ 0.5
PROM1O43490 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.16■□□□□ 0.5
PROM1O43490 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.16■□□□□ 0.5
PROM1O43490 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.16■□□□□ 0.5
PROM1O43490 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.16■□□□□ 0.5
PROM1O43490 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.16■□□□□ 0.5
PROM1O43490 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PROM1O43490 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM1O43490 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.16■□□□□ 0.5
PROM1O43490 KRT16P1-201ENST00000399124 1418 ntBASIC18.15■□□□□ 0.5
PROM1O43490 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PROM1O43490 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.15■□□□□ 0.5
PROM1O43490 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PROM1O43490 AC098818.2-201ENST00000564925 2320 ntBASIC18.15■□□□□ 0.5
PROM1O43490 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 KRT8P41-201ENST00000533985 1514 ntBASIC18.15■□□□□ 0.5
PROM1O43490 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 RPS2P55-201ENST00000397318 883 ntBASIC18.15■□□□□ 0.5
PROM1O43490 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.15■□□□□ 0.5
PROM1O43490 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms