Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
SEMA3EO15041 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.09■■□□□ 1.29
SEMA3EO15041 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.09■■□□□ 1.29
SEMA3EO15041 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
SEMA3EO15041 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SEMA3EO15041 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.09■■□□□ 1.29
SEMA3EO15041 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SEMA3EO15041 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.09■■□□□ 1.29
SEMA3EO15041 MIR4674-201ENST00000582457 87 ntBASIC23.09■■□□□ 1.29
SEMA3EO15041 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SEMA3EO15041 MYC-208ENST00000641036 567 ntBASIC23.09■■□□□ 1.29
SEMA3EO15041 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SEMA3EO15041 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SEMA3EO15041 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SEMA3EO15041 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SEMA3EO15041 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
SEMA3EO15041 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.09■■□□□ 1.29
SEMA3EO15041 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SEMA3EO15041 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SEMA3EO15041 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SEMA3EO15041 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
SEMA3EO15041 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SEMA3EO15041 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SEMA3EO15041 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.08■■□□□ 1.29
SEMA3EO15041 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SEMA3EO15041 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SEMA3EO15041 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.08■■□□□ 1.29
SEMA3EO15041 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.08■■□□□ 1.29
SEMA3EO15041 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.08■■□□□ 1.29
SEMA3EO15041 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
SEMA3EO15041 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SEMA3EO15041 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
SEMA3EO15041 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SEMA3EO15041 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
SEMA3EO15041 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SEMA3EO15041 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.08■■□□□ 1.28
SEMA3EO15041 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
SEMA3EO15041 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.07■■□□□ 1.28
SEMA3EO15041 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.07■■□□□ 1.28
SEMA3EO15041 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SEMA3EO15041 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.07■■□□□ 1.28
SEMA3EO15041 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SEMA3EO15041 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SEMA3EO15041 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.07■■□□□ 1.28
SEMA3EO15041 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SEMA3EO15041 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SEMA3EO15041 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.07■■□□□ 1.28
SEMA3EO15041 HOMER2P1-201ENST00000455653 964 ntBASIC23.07■■□□□ 1.28
SEMA3EO15041 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.07■■□□□ 1.28
SEMA3EO15041 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.07■■□□□ 1.28
SEMA3EO15041 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SEMA3EO15041 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.07■■□□□ 1.28
SEMA3EO15041 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.07■■□□□ 1.28
SEMA3EO15041 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SEMA3EO15041 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SEMA3EO15041 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
SEMA3EO15041 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.06■■□□□ 1.28
SEMA3EO15041 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.06■■□□□ 1.28
SEMA3EO15041 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.06■■□□□ 1.28
SEMA3EO15041 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SEMA3EO15041 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SEMA3EO15041 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.06■■□□□ 1.28
SEMA3EO15041 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 AC087388.1-201ENST00000571370 1112 ntBASIC23.06■■□□□ 1.28
SEMA3EO15041 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.06■■□□□ 1.28
SEMA3EO15041 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.06■■□□□ 1.28
SEMA3EO15041 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 AC008622.2-201ENST00000617006 1229 ntBASIC23.06■■□□□ 1.28
SEMA3EO15041 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.06■■□□□ 1.28
SEMA3EO15041 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 Z82202.1-201ENST00000623446 1880 ntBASIC23.06■■□□□ 1.28
SEMA3EO15041 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.06■■□□□ 1.28
SEMA3EO15041 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEMA3EO15041 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.05■■□□□ 1.28
SEMA3EO15041 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SEMA3EO15041 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SEMA3EO15041 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.05■■□□□ 1.28
SEMA3EO15041 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.05■■□□□ 1.28
SEMA3EO15041 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.05■■□□□ 1.28
SEMA3EO15041 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.05■■□□□ 1.28
SEMA3EO15041 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.05■■□□□ 1.28
SEMA3EO15041 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SEMA3EO15041 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.05■■□□□ 1.28
SEMA3EO15041 AC140113.3-201ENST00000605663 199 ntBASIC23.05■■□□□ 1.28
SEMA3EO15041 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.05■■□□□ 1.28
SEMA3EO15041 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SEMA3EO15041 KRT8P3-201ENST00000519669 1449 ntBASIC23.05■■□□□ 1.28
SEMA3EO15041 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SEMA3EO15041 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SEMA3EO15041 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.05■■□□□ 1.28
SEMA3EO15041 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms