Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.06■□□□□ 0.48
CLDN4O14493 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN4O14493 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN4O14493 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN4O14493 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CLDN4O14493 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN4O14493 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN4O14493 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN4O14493 AC093484.2-201ENST00000580996 2166 ntBASIC18.06■□□□□ 0.48
CLDN4O14493 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN4O14493 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN4O14493 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN4O14493 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CLDN4O14493 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLDN4O14493 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLDN4O14493 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN4O14493 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLDN4O14493 KRT8P41-201ENST00000533985 1514 ntBASIC18.05■□□□□ 0.48
CLDN4O14493 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN4O14493 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN4O14493 AC091390.4-202ENST00000476426 537 ntBASIC18.05■□□□□ 0.48
CLDN4O14493 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN4O14493 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN4O14493 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
CLDN4O14493 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN4O14493 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN4O14493 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN4O14493 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN4O14493 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN4O14493 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN4O14493 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN4O14493 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN4O14493 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN4O14493 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN4O14493 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN4O14493 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN4O14493 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLDN4O14493 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN4O14493 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN4O14493 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN4O14493 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN4O14493 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN4O14493 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN4O14493 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN4O14493 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN4O14493 BCL2-203ENST00000589955 5011 ntBASIC18.04■□□□□ 0.48
CLDN4O14493 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN4O14493 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLDN4O14493 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.04■□□□□ 0.48
CLDN4O14493 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CLDN4O14493 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN4O14493 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN4O14493 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN4O14493 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN4O14493 AP000692.2-201ENST00000608391 879 ntBASIC18.04■□□□□ 0.48
CLDN4O14493 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN4O14493 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN4O14493 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN4O14493 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN4O14493 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CLDN4O14493 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CLDN4O14493 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN4O14493 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN4O14493 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN4O14493 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CLDN4O14493 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN4O14493 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CLDN4O14493 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN4O14493 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLDN4O14493 MESTP1-201ENST00000404287 994 ntBASIC18.03■□□□□ 0.48
CLDN4O14493 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN4O14493 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN4O14493 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CLDN4O14493 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN4O14493 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN4O14493 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN4O14493 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CLDN4O14493 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN4O14493 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN4O14493 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN4O14493 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLDN4O14493 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN4O14493 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN4O14493 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN4O14493 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLDN4O14493 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN4O14493 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN4O14493 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN4O14493 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN4O14493 AC120498.9-201ENST00000339021 3867 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms