Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CFAP99D6REC4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP99D6REC4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP99D6REC4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.1■□□□□ 0.65
CFAP99D6REC4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP99D6REC4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP99D6REC4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.1■□□□□ 0.65
CFAP99D6REC4 AC233702.5-201ENST00000584107 538 ntBASIC19.1■□□□□ 0.65
CFAP99D6REC4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.1■□□□□ 0.65
CFAP99D6REC4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP99D6REC4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP99D6REC4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP99D6REC4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CFAP99D6REC4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP99D6REC4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP99D6REC4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 RPS2P4-201ENST00000476944 856 ntBASIC19.09■□□□□ 0.65
CFAP99D6REC4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 CR392000.1-201ENST00000624770 1228 ntBASIC19.09■□□□□ 0.65
CFAP99D6REC4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.09■□□□□ 0.65
CFAP99D6REC4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP99D6REC4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CFAP99D6REC4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CFAP99D6REC4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.08■□□□□ 0.65
CFAP99D6REC4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CFAP99D6REC4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.08■□□□□ 0.65
CFAP99D6REC4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CFAP99D6REC4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.08■□□□□ 0.65
CFAP99D6REC4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CFAP99D6REC4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.08■□□□□ 0.65
CFAP99D6REC4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP99D6REC4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP99D6REC4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.08■□□□□ 0.64
CFAP99D6REC4 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.08■□□□□ 0.64
CFAP99D6REC4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.08■□□□□ 0.64
CFAP99D6REC4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.08■□□□□ 0.64
CFAP99D6REC4 AC026271.3-201ENST00000571884 352 ntBASIC19.08■□□□□ 0.64
CFAP99D6REC4 AL031985.4-201ENST00000642138 673 ntBASIC19.08■□□□□ 0.64
CFAP99D6REC4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP99D6REC4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP99D6REC4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP99D6REC4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.08■□□□□ 0.64
CFAP99D6REC4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
CFAP99D6REC4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP99D6REC4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP99D6REC4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
CFAP99D6REC4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.08■□□□□ 0.64
CFAP99D6REC4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CFAP99D6REC4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CFAP99D6REC4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP99D6REC4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.08■□□□□ 0.64
CFAP99D6REC4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 BX323043.1-201ENST00000641006 1765 ntBASIC19.07■□□□□ 0.64
CFAP99D6REC4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.07■□□□□ 0.64
CFAP99D6REC4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CFAP99D6REC4 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.07■□□□□ 0.64
CFAP99D6REC4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CFAP99D6REC4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 AL049637.2-201ENST00000641778 930 ntBASIC19.07■□□□□ 0.64
CFAP99D6REC4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.07■□□□□ 0.64
CFAP99D6REC4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CFAP99D6REC4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.07■□□□□ 0.64
CFAP99D6REC4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.07■□□□□ 0.64
CFAP99D6REC4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP99D6REC4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP99D6REC4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP99D6REC4 AC093484.2-201ENST00000580996 2166 ntBASIC19.06■□□□□ 0.64
CFAP99D6REC4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms