Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.38■□□□□ 0.85
RCCD1A6NED2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.38■□□□□ 0.85
RCCD1A6NED2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 AC083906.2-201ENST00000511578 360 ntBASIC20.38■□□□□ 0.85
RCCD1A6NED2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RCCD1A6NED2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
RCCD1A6NED2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.38■□□□□ 0.85
RCCD1A6NED2 AC092666.2-201ENST00000613287 246 ntBASIC20.38■□□□□ 0.85
RCCD1A6NED2 AL121906.2-201ENST00000621597 723 ntBASIC20.38■□□□□ 0.85
RCCD1A6NED2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.38■□□□□ 0.85
RCCD1A6NED2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCCD1A6NED2 AC068880.1-201ENST00000507289 2297 ntBASIC20.37■□□□□ 0.85
RCCD1A6NED2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.37■□□□□ 0.85
RCCD1A6NED2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.36■□□□□ 0.85
RCCD1A6NED2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.36■□□□□ 0.85
RCCD1A6NED2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.36■□□□□ 0.85
RCCD1A6NED2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.36■□□□□ 0.85
RCCD1A6NED2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RCCD1A6NED2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.36■□□□□ 0.85
RCCD1A6NED2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.36■□□□□ 0.85
RCCD1A6NED2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RCCD1A6NED2 AC083906.6-201ENST00000641366 219 ntBASIC20.36■□□□□ 0.85
RCCD1A6NED2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.36■□□□□ 0.85
RCCD1A6NED2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.36■□□□□ 0.85
RCCD1A6NED2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
RCCD1A6NED2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 AC092368.3-202ENST00000574180 1591 ntBASIC20.35■□□□□ 0.85
RCCD1A6NED2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 MYC-209ENST00000641252 345 ntBASIC20.35■□□□□ 0.85
RCCD1A6NED2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 NOC2LP2-201ENST00000407594 1944 ntBASIC20.35■□□□□ 0.85
RCCD1A6NED2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms