Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 AC104417.2-201ENST00000562989 1793 ntBASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 AC093525.10-201ENST00000625130 1569 ntBASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 AC006015.1-201ENST00000429970 570 ntBASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 MIR6821-201ENST00000617625 74 ntBASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 HTR7P1-202ENST00000624664 4411 ntBASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV5A0A0B4J249 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 AL512625.2-201ENST00000417533 625 ntBASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 AC079598.2-202ENST00000546624 1451 ntBASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV5A0A0B4J249 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms