Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 CDCA4P2-201ENST00000441182 718 ntBASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 AC093787.1-201ENST00000450396 207 ntBASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 AP000997.3-201ENST00000623333 2250 ntBASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 AC093503.3-201ENST00000624917 2352 ntBASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 AL691432.2-201ENST00000607222 2038 ntBASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 KRT17P1-201ENST00000399211 1546 ntBASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 AC006970.2-201ENST00000450065 779 ntBASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 AL121832.2-201ENST00000610979 668 ntBASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 IKBKGP1-201ENST00000612193 1073 ntBASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 AC079598.2-202ENST00000546624 1451 ntBASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-4A0A0B4J246 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 MIR663A-201ENST00000385250 93 ntBASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 AL390719.1-204ENST00000412397 1219 ntBASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms