Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC100778.3-201ENST00000580060 1750 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC139713.2-214ENST00000642059 1811 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 Y_RNA.146-201ENST00000363549 102 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 RNU4-20P-201ENST00000365601 151 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 Y_RNA.445-201ENST00000384168 102 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 U3.22-201ENST00000391120 215 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 RPL7P60-201ENST00000397636 735 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 RPL5P18-201ENST00000406671 891 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 RN7SKP267-201ENST00000410381 285 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 RNU6-1304P-201ENST00000411374 106 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 RPEP3-201ENST00000425462 676 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 Z82205.1-201ENST00000428456 297 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC073415.1-201ENST00000449240 153 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AL590639.1-201ENST00000456484 337 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 Y_RNA.639-201ENST00000458981 102 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC021146.2-201ENST00000504736 556 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 Y_RNA.711-201ENST00000516993 102 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 BNIP3P6-201ENST00000549284 499 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC068831.4-201ENST00000556118 109 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC006270.2-201ENST00000578523 652 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AP001330.4-201ENST00000604350 154 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 AC124312.5-201ENST00000604451 268 ntBASIC4.89□□□□□ -1.63
RNF38Q9H0F5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 PABPC1P7-201ENST00000413177 1513 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AL359893.1-201ENST00000447628 1580 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC067945.1-201ENST00000342609 618 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AL161781.1-201ENST00000354277 403 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 RNU6-28P-201ENST00000362378 107 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 RNU6-1297P-201ENST00000384415 104 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 MIR153-1-201ENST00000384914 90 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 MIR1250-201ENST00000408098 113 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC007738.1-201ENST00000413892 348 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 OR1AA1P-201ENST00000419597 916 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 ERLEC1P1-201ENST00000433806 578 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 H2AFZP5-201ENST00000446960 382 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AL356010.1-201ENST00000456364 102 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 MTCO2P29-201ENST00000465212 189 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AL163540.1-201ENST00000485382 386 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC005741.1-201ENST00000511094 432 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC021146.1-201ENST00000511202 716 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 RNU4-29P-201ENST00000515943 174 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 IGKV2D-36-201ENST00000518643 226 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 MIR3146-201ENST00000580367 79 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AL353997.4-201ENST00000586196 166 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC124303.1-201ENST00000605703 360 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 RNU6-89P-201ENST00000606519 100 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 MIR6758-201ENST00000620653 63 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 MIR6715B-201ENST00000637172 77 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC092447.10-201ENST00000620607 1652 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC022893.2-201ENST00000564832 3296 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 MTND5P1-201ENST00000445440 1375 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF38Q9H0F5 AP004289.2-201ENST00000444413 1457 ntBASIC4.88□□□□□ -1.63
RNF38Q9H0F5 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 IQCB2P-201ENST00000401788 1633 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms