Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIX5Q8N196 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIX5Q8N196 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SIX5Q8N196 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.71□□□□□ -1.5
SIX5Q8N196 AL353796.1-201ENST00000561542 3241 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SIX5Q8N196 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIX5Q8N196 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIX5Q8N196 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIX5Q8N196 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIX5Q8N196 RNU6-1155P-201ENST00000363554 107 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 RNU6-288P-201ENST00000363690 104 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 SNORA63.7-201ENST00000365579 123 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 RNU6-45P-201ENST00000384471 107 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 RNU2-43P-201ENST00000410306 190 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AC007562.1-201ENST00000421819 517 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AL354766.1-201ENST00000423396 542 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AL160275.3-201ENST00000423876 471 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 HMGB1P27-201ENST00000431429 603 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AL591212.2-201ENST00000433923 257 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 HMGB1P12-201ENST00000438594 598 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AC105399.1-202ENST00000447303 205 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AC004129.2-201ENST00000457229 287 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AC245028.2-201ENST00000458673 253 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 RPL31P60-201ENST00000478450 367 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AC012158.1-204ENST00000483430 465 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.7□□□□□ -1.5
SIX5Q8N196 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.7□□□□□ -1.5
SIX5Q8N196 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SIX5Q8N196 RNU6-1095P-201ENST00000516148 108 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AC069113.1-201ENST00000517763 267 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.7□□□□□ -1.5
SIX5Q8N196 AC127381.1-201ENST00000555979 939 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.7□□□□□ -1.5
SIX5Q8N196 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.7□□□□□ -1.5
SIX5Q8N196 AC012119.1-201ENST00000603184 222 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 uc_338.18-201ENST00000615451 175 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 AC000095.2-202ENST00000637415 154 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SIX5Q8N196 AL359955.1-201ENST00000455242 3275 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIX5Q8N196 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIX5Q8N196 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
SIX5Q8N196 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIX5Q8N196 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.7□□□□□ -1.5
SIX5Q8N196 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.7□□□□□ -1.5
SIX5Q8N196 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.69□□□□□ -1.5
SIX5Q8N196 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
SIX5Q8N196 ADAM24P-201ENST00000398655 2101 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 SMG1P6-201ENST00000532337 2930 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIX5Q8N196 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SIX5Q8N196 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
SIX5Q8N196 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SIX5Q8N196 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIX5Q8N196 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
SIX5Q8N196 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SIX5Q8N196 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.69□□□□□ -1.5
SIX5Q8N196 MIR133B-201ENST00000362210 119 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 RNU6-266P-201ENST00000364225 107 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 RNU1-59P-201ENST00000364829 162 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 Y_RNA.480-201ENST00000384364 102 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 RNU6-817P-201ENST00000391083 104 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 AL590704.1-201ENST00000402856 794 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.69□□□□□ -1.5
SIX5Q8N196 UBE2V1P4-201ENST00000425374 344 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 AC099799.1-201ENST00000439809 192 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.69□□□□□ -1.5
SIX5Q8N196 RN7SL283P-201ENST00000489055 303 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 DEFB109F-201ENST00000491870 277 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 AC105384.2-201ENST00000508433 640 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.69□□□□□ -1.5
SIX5Q8N196 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.69□□□□□ -1.5
SIX5Q8N196 RNA5SP384-201ENST00000516615 116 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.69□□□□□ -1.5
SIX5Q8N196 HMGB1P40-201ENST00000525121 540 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 AP004607.2-201ENST00000533949 322 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.69□□□□□ -1.5
SIX5Q8N196 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.69□□□□□ -1.5
SIX5Q8N196 MIR5692A1-201ENST00000580523 69 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.69□□□□□ -1.5
SIX5Q8N196 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SIX5Q8N196 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SIX5Q8N196 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.69□□□□□ -1.5
SIX5Q8N196 AC012669.1-201ENST00000603209 283 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 AC104695.3-201ENST00000604052 296 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 NUTF2P8-201ENST00000604593 363 ntBASIC5.69□□□□□ -1.5
SIX5Q8N196 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.69□□□□□ -1.5
SIX5Q8N196 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SIX5Q8N196 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
SIX5Q8N196 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SIX5Q8N196 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIX5Q8N196 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SIX5Q8N196 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SIX5Q8N196 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIX5Q8N196 PCAT14-202ENST00000627127 3935 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIX5Q8N196 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SIX5Q8N196 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms