Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.56□□□□□ -1.84
ZIC3O60481 MTND4LP10-201ENST00000435146 291 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.56□□□□□ -1.84
ZIC3O60481 HMGB1P37-201ENST00000439613 609 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.56□□□□□ -1.84
ZIC3O60481 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.56□□□□□ -1.84
ZIC3O60481 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.56□□□□□ -1.84
ZIC3O60481 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.56□□□□□ -1.84
ZIC3O60481 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.56□□□□□ -1.84
ZIC3O60481 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.56□□□□□ -1.84
ZIC3O60481 SNORD108-201ENST00000459332 71 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.56□□□□□ -1.84
ZIC3O60481 TMED11P-201ENST00000479478 690 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.56□□□□□ -1.84
ZIC3O60481 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.56□□□□□ -1.84
ZIC3O60481 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.56□□□□□ -1.84
ZIC3O60481 RNU6-528P-201ENST00000516926 100 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 AC087369.1-201ENST00000520775 996 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 AC107934.1-201ENST00000522215 217 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZIC3O60481 CR383656.7-201ENST00000548164 174 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.56□□□□□ -1.84
ZIC3O60481 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.56□□□□□ -1.84
ZIC3O60481 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.56□□□□□ -1.84
ZIC3O60481 DUXAP4-201ENST00000603046 613 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 AC011451.2-201ENST00000604303 598 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 HMGN2P28-201ENST00000606102 262 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 AC011816.2-201ENST00000607089 556 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.56□□□□□ -1.84
ZIC3O60481 AC091953.2-201ENST00000623979 160 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.56□□□□□ -1.84
ZIC3O60481 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.56□□□□□ -1.84
ZIC3O60481 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZIC3O60481 AC090337.1-201ENST00000579651 2074 ntBASIC3.56□□□□□ -1.84
ZIC3O60481 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZIC3O60481 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
ZIC3O60481 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
ZIC3O60481 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.56□□□□□ -1.84
ZIC3O60481 AC027514.1-201ENST00000588561 1603 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.55□□□□□ -1.84
ZIC3O60481 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.55□□□□□ -1.84
ZIC3O60481 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
ZIC3O60481 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZIC3O60481 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZIC3O60481 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZIC3O60481 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
ZIC3O60481 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ZIC3O60481 RNA5SP502-201ENST00000362694 119 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 RNU6-1249P-201ENST00000363237 111 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 RNU4-1-201ENST00000363925 141 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZIC3O60481 RNU6-837P-201ENST00000391056 108 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 RPL23AP48-201ENST00000406913 488 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AL603766.1-201ENST00000407763 664 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 RNU6-195P-201ENST00000411352 109 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 UBE2V1P10-201ENST00000414685 269 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 AL353748.1-201ENST00000440753 474 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 MTND1P9-201ENST00000453775 944 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.55□□□□□ -1.84
ZIC3O60481 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 RN7SL132P-201ENST00000478131 296 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 PPIAP15-201ENST00000479662 484 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 RPL31P61-201ENST00000496160 376 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AC107401.1-201ENST00000503426 685 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AC114967.1-201ENST00000504890 259 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ZIC3O60481 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 RNU6-1095P-201ENST00000516148 108 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 AP000907.2-201ENST00000530827 353 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.55□□□□□ -1.84
ZIC3O60481 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.55□□□□□ -1.84
ZIC3O60481 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZIC3O60481 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 AC093227.2-201ENST00000589357 285 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.55□□□□□ -1.84
ZIC3O60481 AL020997.2-201ENST00000602607 184 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AC068790.3-201ENST00000602988 553 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AC008638.3-201ENST00000603341 463 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AC107304.1-201ENST00000604229 296 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.55□□□□□ -1.84
ZIC3O60481 AC072046.2-201ENST00000618366 268 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AC136475.10-201ENST00000620253 385 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AL354798.1-201ENST00000622505 329 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.55□□□□□ -1.84
ZIC3O60481 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZIC3O60481 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.55□□□□□ -1.84
ZIC3O60481 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ZIC3O60481 ZNF962P-201ENST00000443465 3140 ntBASIC3.55□□□□□ -1.84
ZIC3O60481 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZIC3O60481 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms