Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 OR56B2P-202ENST00000641377 2453 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AF127577.6-201ENST00000623352 2191 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DDX56Q9NY93 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DDX56Q9NY93 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DDX56Q9NY93 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 RNU4-1-201ENST00000363925 141 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 Y_RNA.582-201ENST00000391023 95 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 BX295541.1-201ENST00000417774 250 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 AC104850.1-201ENST00000435940 476 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 AL031667.1-201ENST00000440222 725 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 AC079804.1-201ENST00000461922 436 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 RBM43P1-201ENST00000476891 1081 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 RN7SL826P-201ENST00000479724 288 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 NDUFB4P9-201ENST00000511646 388 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 SYF2P1-201ENST00000550658 413 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 RPL21P12-201ENST00000559810 515 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 CYP4A43P-201ENST00000568156 121 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 AL391840.1-201ENST00000571144 367 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 ZNF415P1-201ENST00000582279 1166 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 MIR4480-201ENST00000582492 71 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 Z99129.1-201ENST00000612510 255 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 AL110115.1-201ENST00000614396 364 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 AC026368.1-201ENST00000614934 690 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 AL732618.1-201ENST00000623251 301 ntBASIC4.56□□□□□ -1.68
DDX56Q9NY93 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DDX56Q9NY93 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
DDX56Q9NY93 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DDX56Q9NY93 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DDX56Q9NY93 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX56Q9NY93 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
DDX56Q9NY93 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 AC092447.7-201ENST00000422212 1621 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 HSPE1P11-201ENST00000339579 310 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 RNU1-39P-201ENST00000383897 165 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 RNU6-195P-201ENST00000411352 109 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 SNRPFP1-201ENST00000414761 252 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 NDUFB4P7-201ENST00000423198 363 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 RPL7AP25-201ENST00000423357 805 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 USP9YP14-201ENST00000430663 563 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 HLA-N-201ENST00000437516 135 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 RPS24P1-201ENST00000438550 371 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 AL359385.1-201ENST00000456509 365 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 SNRPGP3-201ENST00000469405 227 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 AC010493.1-201ENST00000513479 292 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 AC022968.1-201ENST00000567372 442 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 MTND1P15-201ENST00000579262 949 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 AC068790.5-201ENST00000602741 355 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 MIR98-201ENST00000606724 119 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 AC103710.2-201ENST00000609912 942 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 MIR6780A-201ENST00000615089 68 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 AC002546.1-201ENST00000588041 2504 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 AC106871.1-201ENST00000568324 3102 ntBASIC4.55□□□□□ -1.68
DDX56Q9NY93 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DDX56Q9NY93 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
DDX56Q9NY93 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX56Q9NY93 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
DDX56Q9NY93 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DDX56Q9NY93 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX56Q9NY93 SNORD56.2-201ENST00000363242 71 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 RNU6-511P-201ENST00000363496 107 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 RN7SKP53-201ENST00000411337 315 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 AL160275.2-201ENST00000412010 394 ntBASIC4.54□□□□□ -1.68
DDX56Q9NY93 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 265.4 ms