Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 Y_RNA.358-201ENST00000365491 99 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 Y_RNA.400-201ENST00000383963 111 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC6.34□□□□□ -1.39
LRCH3Q96II8 RPL21P90-201ENST00000415692 466 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 TRAPPC2P4-201ENST00000421750 331 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 Y_RNA.638-201ENST00000459374 113 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 RN7SL51P-201ENST00000468230 285 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 RPL30P1-201ENST00000488676 339 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 IGLV2-34-201ENST00000490007 283 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 AC008897.1-201ENST00000494006 347 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC6.34□□□□□ -1.39
LRCH3Q96II8 AC016065.2-201ENST00000514530 444 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 RNY3P16-201ENST00000516338 101 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 RNU6-677P-201ENST00000516914 101 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.34□□□□□ -1.39
LRCH3Q96II8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LRCH3Q96II8 H3F3AP1-201ENST00000559984 334 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 FAM60BP-201ENST00000578364 658 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 AC006116.3-201ENST00000592968 361 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 AL359881.1-201ENST00000602916 267 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.34□□□□□ -1.39
LRCH3Q96II8 AC006329.2-201ENST00000611491 394 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 AC240442.1-201ENST00000616055 283 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 MIR6758-201ENST00000620653 63 ntBASIC6.34□□□□□ -1.39
LRCH3Q96II8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.34□□□□□ -1.39
LRCH3Q96II8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LRCH3Q96II8 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LRCH3Q96II8 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LRCH3Q96II8 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.34□□□□□ -1.39
LRCH3Q96II8 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
LRCH3Q96II8 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.34□□□□□ -1.4
LRCH3Q96II8 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
LRCH3Q96II8 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.34□□□□□ -1.4
LRCH3Q96II8 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.34□□□□□ -1.4
LRCH3Q96II8 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 AC110373.1-201ENST00000505994 3505 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 AC073365.1-203ENST00000641055 1992 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 CDC27P2-201ENST00000425026 1922 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 DPPA2P2-201ENST00000418220 897 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 AC093162.1-201ENST00000419682 124 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 RPL23AP33-201ENST00000442301 452 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 RPL37P6-202ENST00000464216 403 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 AC083795.1-201ENST00000491760 320 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 MTND3P25-201ENST00000509243 135 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 MIR4308-201ENST00000580634 81 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 AC209154.1-201ENST00000582156 337 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 AL020997.2-201ENST00000602607 184 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 AC006077.1-201ENST00000604746 343 ntBASIC6.33□□□□□ -1.4
LRCH3Q96II8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
LRCH3Q96II8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRCH3Q96II8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LRCH3Q96II8 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
LRCH3Q96II8 AC010624.4-201ENST00000597606 1351 ntBASIC6.32□□□□□ -1.4
LRCH3Q96II8 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
LRCH3Q96II8 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
LRCH3Q96II8 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.32□□□□□ -1.4
LRCH3Q96II8 MAPK10-287ENST00000641217 3037 ntBASIC6.32□□□□□ -1.4
LRCH3Q96II8 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
LRCH3Q96II8 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.32□□□□□ -1.4
LRCH3Q96II8 U3.2-201ENST00000362981 210 ntBASIC6.32□□□□□ -1.4
LRCH3Q96II8 RNU6-1255P-201ENST00000363434 112 ntBASIC6.32□□□□□ -1.4
LRCH3Q96II8 RNU105B-201ENST00000364478 208 ntBASIC6.32□□□□□ -1.4
LRCH3Q96II8 RNU6-326P-201ENST00000365480 107 ntBASIC6.32□□□□□ -1.4
LRCH3Q96II8 MIR192-201ENST00000384915 110 ntBASIC6.32□□□□□ -1.4
LRCH3Q96II8 RNU6-257P-201ENST00000410238 98 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms