Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 Y_RNA.76-201ENST00000362931 109 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 RNU11-201ENST00000387069 134 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 MIR1275-201ENST00000408770 80 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 RNA5SP494-201ENST00000410653 129 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 RNU6-607P-201ENST00000411283 108 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AL390119.1-201ENST00000440329 312 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC104339.1-201ENST00000465478 348 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC109925.1-201ENST00000478069 331 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AL117692.1-201ENST00000494283 713 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 RN7SKP147-201ENST00000517154 244 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 RN7SKP35-201ENST00000517210 151 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 FKBP1BP1-201ENST00000553366 325 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC068768.2-201ENST00000602352 343 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AL360012.1-201ENST00000602813 131 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC015982.1-201ENST00000608113 465 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 U6.92-201ENST00000636464 89 ntBASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC116Q8IYX3 AC140134.1-201ENST00000511830 3544 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 MTND5P9-201ENST00000503854 1755 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 HAUS6P2-201ENST00000433254 2404 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 Y_RNA.143-201ENST00000363520 106 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 U3.13-201ENST00000364804 214 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 SNORA51.9-201ENST00000384295 124 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 ENSAP1-201ENST00000392855 326 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 HSPE1P8-201ENST00000406997 288 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 CYCSP33-201ENST00000414485 327 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AC245884.2-201ENST00000426257 404 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AC004866.2-201ENST00000438285 481 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 HMGB1P25-201ENST00000468402 607 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AC090602.1-201ENST00000469695 252 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AC098847.1-201ENST00000473094 348 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 RNU7-200P-201ENST00000516105 62 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AC084121.1-201ENST00000533882 835 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AC127381.1-201ENST00000555979 939 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 RPL23AP87-202ENST00000573039 466 ntBASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC116Q8IYX3 AL359955.1-201ENST00000455242 3275 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AL137141.1-201ENST00000624622 4836 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 Y_RNA.324-201ENST00000365165 102 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 VTI1BP4-201ENST00000427516 527 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC097463.1-201ENST00000447288 481 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AC118758.1-202ENST00000454719 225 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 AL445433.1-201ENST00000457507 257 ntBASIC5.61□□□□□ -1.51
CCDC116Q8IYX3 SEPT14P8-201ENST00000508026 178 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms