Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
NKX6-1P78426 TAB3P1-202ENST00000452645 1634 ntBASIC4.17□□□□□ -1.74
NKX6-1P78426 OR14L1P-202ENST00000641545 3009 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX6-1P78426 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AC009643.2-201ENST00000603543 1448 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX6-1P78426 AL590240.1-201ENST00000334118 313 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 RNA5SP28-201ENST00000363841 119 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 RNU6-1090P-201ENST00000364065 94 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NKX6-1P78426 RNU6-877P-201ENST00000383868 107 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 RNU6-74P-201ENST00000384235 107 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NKX6-1P78426 AL121834.1-202ENST00000404494 277 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 RNU2-36P-201ENST00000410361 191 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX6-1P78426 E2F6P2-201ENST00000420708 748 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AL645608.4-201ENST00000423619 154 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 RPL23AP1-201ENST00000428990 471 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 USP12PX-201ENST00000432383 1057 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AC016831.4-201ENST00000438302 307 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AL359073.1-201ENST00000448036 403 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AC010285.1-201ENST00000470580 392 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 RPL23AP2-201ENST00000471227 466 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 S100A11P1-201ENST00000477525 312 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 RN7SL558P-201ENST00000497468 299 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AC116353.2-201ENST00000505332 712 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AC007016.1-201ENST00000512110 244 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX6-1P78426 RNU6-390P-201ENST00000516259 103 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 Vault.1-201ENST00000516474 102 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 RN7SKP21-201ENST00000516503 220 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 RNU6-840P-201ENST00000517275 65 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX6-1P78426 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX6-1P78426 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AC093012.1-202ENST00000549403 582 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX6-1P78426 ARL2BPP2-201ENST00000550907 489 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX6-1P78426 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AC055876.1-202ENST00000567053 138 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 SNORA74C-1-201ENST00000580726 201 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AC022726.1-201ENST00000587475 207 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX6-1P78426 AL353748.2-201ENST00000622148 471 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 AC055839.1-201ENST00000634467 498 ntBASIC4.16□□□□□ -1.74
NKX6-1P78426 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX6-1P78426 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NKX6-1P78426 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
NKX6-1P78426 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.15□□□□□ -1.74
NKX6-1P78426 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NKX6-1P78426 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NKX6-1P78426 SALL4P2-201ENST00000423288 2910 ntBASIC4.15□□□□□ -1.74
NKX6-1P78426 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
NKX6-1P78426 AC139769.1-204ENST00000472297 1931 ntBASIC4.15□□□□□ -1.74
NKX6-1P78426 AC092326.2-201ENST00000624772 1561 ntBASIC4.15□□□□□ -1.74
NKX6-1P78426 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.15□□□□□ -1.74
NKX6-1P78426 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NKX6-1P78426 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NKX6-1P78426 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
NKX6-1P78426 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 Y_RNA.89-201ENST00000363031 102 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 RNA5SP447-201ENST00000363749 119 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 Y_RNA.295-201ENST00000364918 102 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX6-1P78426 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 RNU6-76P-201ENST00000384060 104 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 SNORA70F-201ENST00000384142 135 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AC022028.1-201ENST00000412054 408 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 MTCO1P39-201ENST00000426148 480 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX6-1P78426 USP9YP7-201ENST00000436723 430 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.15□□□□□ -1.75
NKX6-1P78426 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 NFU1P2-201ENST00000448700 469 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX6-1P78426 USP9YP32-201ENST00000452432 430 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 NUTF2P7-201ENST00000453086 375 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AL445433.1-201ENST00000457507 257 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 RNU7-63P-201ENST00000459054 62 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AC083798.1-201ENST00000472671 131 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AC126389.1-201ENST00000477436 290 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 RN7SL432P-201ENST00000484057 298 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 HSPD1P15-201ENST00000505573 1122 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms