Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RTP1P59025 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RTP1P59025 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RTP1P59025 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RTP1P59025 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RTP1P59025 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RTP1P59025 AL161781.1-201ENST00000354277 403 ntBASIC5.14□□□□□ -1.59
RTP1P59025 Y_RNA.216-201ENST00000364205 93 ntBASIC5.14□□□□□ -1.59
RTP1P59025 RNU6-474P-201ENST00000384243 107 ntBASIC5.14□□□□□ -1.59
RTP1P59025 MIR559-201ENST00000385188 96 ntBASIC5.14□□□□□ -1.59
RTP1P59025 Y_RNA.579-201ENST00000390939 94 ntBASIC5.14□□□□□ -1.59
RTP1P59025 RPS15AP12-201ENST00000419498 388 ntBASIC5.14□□□□□ -1.59
RTP1P59025 MTCYBP8-201ENST00000422855 651 ntBASIC5.14□□□□□ -1.59
RTP1P59025 DUTP6-201ENST00000425573 462 ntBASIC5.14□□□□□ -1.59
RTP1P59025 HSFY6P-201ENST00000445573 403 ntBASIC5.14□□□□□ -1.59
RTP1P59025 AC079781.2-201ENST00000446424 169 ntBASIC5.14□□□□□ -1.59
RTP1P59025 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.14□□□□□ -1.59
RTP1P59025 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.14□□□□□ -1.59
RTP1P59025 SCARNA10-201ENST00000459255 330 ntBASIC5.14□□□□□ -1.59
RTP1P59025 HMGN2P26-201ENST00000463169 339 ntBASIC5.14□□□□□ -1.59
RTP1P59025 MTCO2P29-201ENST00000465212 189 ntBASIC5.14□□□□□ -1.59
RTP1P59025 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.14□□□□□ -1.59
RTP1P59025 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.14□□□□□ -1.59
RTP1P59025 RPS27AP18-201ENST00000515536 459 ntBASIC5.14□□□□□ -1.59
RTP1P59025 RNA5SP337-201ENST00000517007 109 ntBASIC5.14□□□□□ -1.59
RTP1P59025 ELOCP31-201ENST00000540463 467 ntBASIC5.14□□□□□ -1.59
RTP1P59025 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.14□□□□□ -1.59
RTP1P59025 MIR3158-1-201ENST00000583596 81 ntBASIC5.14□□□□□ -1.59
RTP1P59025 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.14□□□□□ -1.59
RTP1P59025 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.14□□□□□ -1.59
RTP1P59025 AC040896.1-201ENST00000613819 479 ntBASIC5.14□□□□□ -1.59
RTP1P59025 SNX18P1Y-201ENST00000616231 511 ntBASIC5.14□□□□□ -1.59
RTP1P59025 AC010205.1-201ENST00000616668 449 ntBASIC5.14□□□□□ -1.59
RTP1P59025 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RTP1P59025 MAPK10-286ENST00000641208 8747 ntBASIC5.14□□□□□ -1.59
RTP1P59025 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.14□□□□□ -1.59
RTP1P59025 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RTP1P59025 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RTP1P59025 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
RTP1P59025 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RTP1P59025 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RTP1P59025 AL118496.1-201ENST00000440201 1812 ntBASIC5.13□□□□□ -1.59
RTP1P59025 MTND5P33-201ENST00000571250 1450 ntBASIC5.13□□□□□ -1.59
RTP1P59025 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.13□□□□□ -1.59
RTP1P59025 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RTP1P59025 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTP1P59025 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTP1P59025 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RTP1P59025 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RTP1P59025 Y_RNA.259-201ENST00000364619 101 ntBASIC5.13□□□□□ -1.59
RTP1P59025 RNU6-996P-201ENST00000365438 107 ntBASIC5.13□□□□□ -1.59
RTP1P59025 SNORA4.3-201ENST00000365564 137 ntBASIC5.13□□□□□ -1.59
RTP1P59025 SNORD42.2-201ENST00000365570 69 ntBASIC5.13□□□□□ -1.59
RTP1P59025 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTP1P59025 RNU6-1160P-201ENST00000384546 104 ntBASIC5.13□□□□□ -1.59
RTP1P59025 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.13□□□□□ -1.59
RTP1P59025 AL022722.2-201ENST00000402519 180 ntBASIC5.13□□□□□ -1.59
RTP1P59025 AL592291.1-201ENST00000403830 352 ntBASIC5.13□□□□□ -1.59
RTP1P59025 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.13□□□□□ -1.59
RTP1P59025 AC127526.1-201ENST00000417526 366 ntBASIC5.13□□□□□ -1.59
RTP1P59025 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.13□□□□□ -1.59
RTP1P59025 RPL36AP10-201ENST00000421785 322 ntBASIC5.13□□□□□ -1.59
RTP1P59025 AL132765.1-201ENST00000434165 553 ntBASIC5.13□□□□□ -1.59
RTP1P59025 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.13□□□□□ -1.59
RTP1P59025 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.13□□□□□ -1.59
RTP1P59025 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.13□□□□□ -1.59
RTP1P59025 AL356010.1-201ENST00000456364 102 ntBASIC5.13□□□□□ -1.59
RTP1P59025 RN7SL98P-201ENST00000462271 300 ntBASIC5.13□□□□□ -1.59
RTP1P59025 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.13□□□□□ -1.59
RTP1P59025 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.13□□□□□ -1.59
RTP1P59025 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.13□□□□□ -1.59
RTP1P59025 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.13□□□□□ -1.59
RTP1P59025 AC026464.5-201ENST00000562497 722 ntBASIC5.13□□□□□ -1.59
RTP1P59025 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.13□□□□□ -1.59
RTP1P59025 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.13□□□□□ -1.59
RTP1P59025 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.13□□□□□ -1.59
RTP1P59025 MIR8069-1-201ENST00000616627 86 ntBASIC5.13□□□□□ -1.59
RTP1P59025 AC079684.1-201ENST00000621405 437 ntBASIC5.13□□□□□ -1.59
RTP1P59025 MIR8069-2-201ENST00000621412 86 ntBASIC5.13□□□□□ -1.59
RTP1P59025 MIR3653-201ENST00000625572 110 ntBASIC5.13□□□□□ -1.59
RTP1P59025 MIR492-201ENST00000638676 116 ntBASIC5.13□□□□□ -1.59
RTP1P59025 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTP1P59025 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTP1P59025 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTP1P59025 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RTP1P59025 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTP1P59025 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RTP1P59025 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTP1P59025 SPRR2C-201ENST00000290702 219 ntBASIC5.12□□□□□ -1.59
RTP1P59025 RNU6-254P-201ENST00000363377 107 ntBASIC5.12□□□□□ -1.59
RTP1P59025 RNU1-83P-201ENST00000363426 164 ntBASIC5.12□□□□□ -1.59
RTP1P59025 RNA5SP366-201ENST00000365454 123 ntBASIC5.12□□□□□ -1.59
RTP1P59025 SNORA70.4-201ENST00000365509 134 ntBASIC5.12□□□□□ -1.59
RTP1P59025 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTP1P59025 RNU6-43P-201ENST00000384302 107 ntBASIC5.12□□□□□ -1.59
RTP1P59025 RPL7P60-201ENST00000397636 735 ntBASIC5.12□□□□□ -1.59
RTP1P59025 DSTNP4-201ENST00000399472 474 ntBASIC5.12□□□□□ -1.59
RTP1P59025 AL023807.1-201ENST00000407932 359 ntBASIC5.12□□□□□ -1.59
RTP1P59025 RNA5SP296-201ENST00000410523 111 ntBASIC5.12□□□□□ -1.59
RTP1P59025 RNU6-628P-201ENST00000410675 107 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms