Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD13P35453 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD13P35453 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXD13P35453 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD13P35453 AL590103.1-201ENST00000434488 307 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 HSPD1P21-201ENST00000436541 245 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
HOXD13P35453 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD13P35453 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD13P35453 AC112653.1-201ENST00000443851 386 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD13P35453 RPL21P23-201ENST00000446654 460 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXD13P35453 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD13P35453 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD13P35453 CFTRP1-201ENST00000456646 183 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 AC023598.1-201ENST00000472521 361 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXD13P35453 AC025518.1-201ENST00000479856 347 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 LINC00888-204ENST00000487386 421 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 ARL2BPP6-201ENST00000512757 439 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 AC026801.2-201ENST00000515352 425 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXD13P35453 AC007458.1-201ENST00000542812 373 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXD13P35453 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD13P35453 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD13P35453 AL020997.2-201ENST00000602607 184 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 AL158211.4-201ENST00000606988 584 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 AC087683.2-201ENST00000611384 326 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 AL450489.1-201ENST00000612071 468 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
HOXD13P35453 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD13P35453 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HOXD13P35453 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD13P35453 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD13P35453 AL136164.4-201ENST00000625013 2135 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD13P35453 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD13P35453 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXD13P35453 AL513185.3-201ENST00000433335 1300 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD13P35453 DEFB108F-201ENST00000344638 222 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AL672167.1-206ENST00000356293 943 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 MIR30E-201ENST00000362104 92 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 RNU6-1078P-201ENST00000364522 103 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD13P35453 AL359837.1-201ENST00000381357 287 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 RNU6-1200P-201ENST00000384162 107 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HOXD13P35453 MIR1305-201ENST00000408300 86 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXD13P35453 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXD13P35453 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD13P35453 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD13P35453 AP000907.1-201ENST00000428428 510 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXD13P35453 AC024082.2-201ENST00000434771 238 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 UBE2FP3-201ENST00000436366 524 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 THAP5P1-201ENST00000439089 262 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AL591503.2-201ENST00000442314 1005 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AL357552.1-201ENST00000445254 415 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AL592447.1-201ENST00000447592 540 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD13P35453 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD13P35453 SNORA84-201ENST00000459229 133 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AP000563.1-201ENST00000490865 758 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD13P35453 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD13P35453 AC022447.3-201ENST00000506865 495 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AC026784.1-201ENST00000507986 352 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 POU5F1P7-201ENST00000508759 541 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 RNU6-678P-201ENST00000516832 109 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 MIR2276-201ENST00000516886 89 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.8□□□□□ -1.8
HOXD13P35453 DEFB108D-201ENST00000527787 222 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD13P35453 MIR3186-201ENST00000577404 85 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXD13P35453 AP001429.1-201ENST00000602568 530 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AC024560.3-201ENST00000608482 349 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AC140725.3-201ENST00000616193 880 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 AC079597.1-201ENST00000624306 508 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 MAPK10-373ENST00000641983 6772 ntBASIC3.8□□□□□ -1.8
HOXD13P35453 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD13P35453 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD13P35453 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD13P35453 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD13P35453 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD13P35453 AC090740.1-201ENST00000623193 2262 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HOXD13P35453 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXD13P35453 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
HOXD13P35453 AC009812.4-201ENST00000569134 1805 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXD13P35453 AC058791.1-201ENST00000608412 3198 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXD13P35453 AP000568.1-201ENST00000282964 442 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 RNU4-35P-201ENST00000362588 141 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms