Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RN7SKP238-201ENST00000516483 249 ntBASIC5.54□□□□□ -1.52
GPC1P35052 RN7SKP35-201ENST00000517210 151 ntBASIC5.54□□□□□ -1.52
GPC1P35052 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
GPC1P35052 AC007566.2-201ENST00000603642 413 ntBASIC5.54□□□□□ -1.52
GPC1P35052 AC124916.2-201ENST00000604416 224 ntBASIC5.54□□□□□ -1.52
GPC1P35052 AL133481.2-203ENST00000607558 139 ntBASIC5.54□□□□□ -1.52
GPC1P35052 AC092266.1-201ENST00000610958 165 ntBASIC5.54□□□□□ -1.52
GPC1P35052 AL139099.4-201ENST00000614802 114 ntBASIC5.54□□□□□ -1.52
GPC1P35052 RNA5SP439-201ENST00000617595 124 ntBASIC5.54□□□□□ -1.52
GPC1P35052 AC245014.3-201ENST00000618589 347 ntBASIC5.54□□□□□ -1.52
GPC1P35052 AL031601.2-202ENST00000622650 282 ntBASIC5.54□□□□□ -1.52
GPC1P35052 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
GPC1P35052 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.54□□□□□ -1.52
GPC1P35052 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.54□□□□□ -1.52
GPC1P35052 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.54□□□□□ -1.52
GPC1P35052 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GPC1P35052 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
GPC1P35052 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GPC1P35052 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.54□□□□□ -1.52
GPC1P35052 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GPC1P35052 AC009951.1-201ENST00000623674 2614 ntBASIC5.54□□□□□ -1.52
GPC1P35052 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GPC1P35052 Z75746.1-201ENST00000440243 2080 ntBASIC5.54□□□□□ -1.52
GPC1P35052 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
GPC1P35052 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GPC1P35052 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.53□□□□□ -1.52
GPC1P35052 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GPC1P35052 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
GPC1P35052 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
GPC1P35052 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
GPC1P35052 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.53□□□□□ -1.52
GPC1P35052 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.53□□□□□ -1.52
GPC1P35052 SELENOWP1-201ENST00000322792 252 ntBASIC5.53□□□□□ -1.52
GPC1P35052 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GPC1P35052 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GPC1P35052 SNORA51.9-201ENST00000384295 124 ntBASIC5.53□□□□□ -1.52
GPC1P35052 MIR130B-202ENST00000385018 82 ntBASIC5.53□□□□□ -1.52
GPC1P35052 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
GPC1P35052 RNU6-700P-201ENST00000391043 107 ntBASIC5.53□□□□□ -1.52
GPC1P35052 RPL11P3-201ENST00000395256 523 ntBASIC5.53□□□□□ -1.52
GPC1P35052 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.53□□□□□ -1.52
GPC1P35052 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.53□□□□□ -1.52
GPC1P35052 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.53□□□□□ -1.52
GPC1P35052 RPL23AP22-201ENST00000437556 453 ntBASIC5.53□□□□□ -1.52
GPC1P35052 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.53□□□□□ -1.52
GPC1P35052 KRT8P51-201ENST00000438938 274 ntBASIC5.53□□□□□ -1.52
GPC1P35052 PTMAP6-201ENST00000439110 327 ntBASIC5.53□□□□□ -1.52
GPC1P35052 AC005077.1-201ENST00000449226 375 ntBASIC5.53□□□□□ -1.52
GPC1P35052 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.53□□□□□ -1.52
GPC1P35052 MTND3P25-201ENST00000509243 135 ntBASIC5.53□□□□□ -1.52
GPC1P35052 SERF1AP1-201ENST00000514575 187 ntBASIC5.53□□□□□ -1.52
GPC1P35052 RNU6-1338P-201ENST00000516328 91 ntBASIC5.53□□□□□ -1.52
GPC1P35052 SCARNA24.2-201ENST00000516968 130 ntBASIC5.53□□□□□ -1.52
GPC1P35052 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.53□□□□□ -1.52
GPC1P35052 AC103783.1-201ENST00000520506 373 ntBASIC5.53□□□□□ -1.52
GPC1P35052 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.53□□□□□ -1.52
GPC1P35052 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.53□□□□□ -1.52
GPC1P35052 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.53□□□□□ -1.52
GPC1P35052 AC024405.2-202ENST00000532731 184 ntBASIC5.53□□□□□ -1.52
GPC1P35052 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.53□□□□□ -1.52
GPC1P35052 AC002310.3-201ENST00000569728 723 ntBASIC5.53□□□□□ -1.52
GPC1P35052 AC006115.2-201ENST00000596823 202 ntBASIC5.53□□□□□ -1.52
GPC1P35052 AC004832.4-201ENST00000608952 331 ntBASIC5.53□□□□□ -1.52
GPC1P35052 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.53□□□□□ -1.52
GPC1P35052 AC005344.1-201ENST00000613391 459 ntBASIC5.53□□□□□ -1.52
GPC1P35052 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.53□□□□□ -1.52
GPC1P35052 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.53□□□□□ -1.52
GPC1P35052 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GPC1P35052 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
GPC1P35052 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GPC1P35052 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
GPC1P35052 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.53□□□□□ -1.52
GPC1P35052 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GPC1P35052 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.53□□□□□ -1.52
GPC1P35052 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
GPC1P35052 AC004158.1-201ENST00000564508 4319 ntBASIC5.52□□□□□ -1.53
GPC1P35052 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GPC1P35052 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GPC1P35052 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
GPC1P35052 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GPC1P35052 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
GPC1P35052 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
GPC1P35052 AC010266.2-201ENST00000564741 3255 ntBASIC5.52□□□□□ -1.53
GPC1P35052 Y_RNA.199-201ENST00000364014 102 ntBASIC5.52□□□□□ -1.53
GPC1P35052 RNU6-371P-201ENST00000364283 108 ntBASIC5.52□□□□□ -1.53
GPC1P35052 AL513475.1-201ENST00000406602 315 ntBASIC5.52□□□□□ -1.53
GPC1P35052 HSPE1P8-201ENST00000406997 288 ntBASIC5.52□□□□□ -1.53
GPC1P35052 Y_RNA.592-201ENST00000410274 109 ntBASIC5.52□□□□□ -1.53
GPC1P35052 RPL30P3-201ENST00000424262 333 ntBASIC5.52□□□□□ -1.53
GPC1P35052 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.52□□□□□ -1.53
GPC1P35052 CRIP1P1-201ENST00000427567 185 ntBASIC5.52□□□□□ -1.53
GPC1P35052 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.52□□□□□ -1.53
GPC1P35052 EEF1A1P1-201ENST00000447052 739 ntBASIC5.52□□□□□ -1.53
GPC1P35052 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GPC1P35052 AC118758.1-202ENST00000454719 225 ntBASIC5.52□□□□□ -1.53
GPC1P35052 RN7SL269P-201ENST00000467795 305 ntBASIC5.52□□□□□ -1.53
GPC1P35052 RNU6-1278P-201ENST00000516130 107 ntBASIC5.52□□□□□ -1.53
GPC1P35052 RNA5SP473-201ENST00000516402 125 ntBASIC5.52□□□□□ -1.53
GPC1P35052 snoU109.6-201ENST00000516831 118 ntBASIC5.52□□□□□ -1.53
GPC1P35052 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms