Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SSXP9-201ENST00000417503 292 ntBASIC3.34□□□□□ -1.87
SNX3O60493 OR1AA1P-201ENST00000419597 916 ntBASIC3.34□□□□□ -1.87
SNX3O60493 AL365203.2-201ENST00000423444 196 ntBASIC3.34□□□□□ -1.87
SNX3O60493 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX3O60493 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX3O60493 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.34□□□□□ -1.87
SNX3O60493 MTCYBP39-201ENST00000437562 491 ntBASIC3.34□□□□□ -1.87
SNX3O60493 AC091862.1-201ENST00000438016 1100 ntBASIC3.34□□□□□ -1.87
SNX3O60493 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX3O60493 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX3O60493 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX3O60493 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX3O60493 SBDSP1-204ENST00000453858 737 ntBASIC3.34□□□□□ -1.87
SNX3O60493 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX3O60493 CEACAMP4-201ENST00000457676 421 ntBASIC3.34□□□□□ -1.87
SNX3O60493 snoU13.4-201ENST00000458916 104 ntBASIC3.34□□□□□ -1.87
SNX3O60493 AC093663.1-201ENST00000497190 394 ntBASIC3.34□□□□□ -1.87
SNX3O60493 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.34□□□□□ -1.87
SNX3O60493 AC013828.2-201ENST00000532487 235 ntBASIC3.34□□□□□ -1.87
SNX3O60493 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX3O60493 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX3O60493 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX3O60493 AC090888.1-201ENST00000561335 1141 ntBASIC3.34□□□□□ -1.87
SNX3O60493 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX3O60493 AC012435.1-202ENST00000568772 240 ntBASIC3.34□□□□□ -1.87
SNX3O60493 AC135628.1-201ENST00000568867 534 ntBASIC3.34□□□□□ -1.87
SNX3O60493 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX3O60493 MIR544B-201ENST00000582372 78 ntBASIC3.34□□□□□ -1.87
SNX3O60493 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX3O60493 VIS1.1-201ENST00000610517 203 ntBASIC3.34□□□□□ -1.87
SNX3O60493 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.34□□□□□ -1.87
SNX3O60493 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SNX3O60493 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.34□□□□□ -1.87
SNX3O60493 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX3O60493 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNX3O60493 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
SNX3O60493 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX3O60493 AC092447.10-201ENST00000620607 1652 ntBASIC3.33□□□□□ -1.88
SNX3O60493 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX3O60493 RNU6-553P-201ENST00000364047 96 ntBASIC3.33□□□□□ -1.88
SNX3O60493 RNU6-853P-201ENST00000364306 107 ntBASIC3.33□□□□□ -1.88
SNX3O60493 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNX3O60493 RNU5A-2P-201ENST00000384337 116 ntBASIC3.33□□□□□ -1.88
SNX3O60493 PTMAP5-201ENST00000393073 333 ntBASIC3.33□□□□□ -1.88
SNX3O60493 HSPE1P26-201ENST00000405341 275 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AL445189.1-201ENST00000405722 338 ntBASIC3.33□□□□□ -1.88
SNX3O60493 MTCO1P17-201ENST00000411522 491 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX3O60493 RPL32P35-201ENST00000415214 394 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX3O60493 MTND2P18-201ENST00000419962 1030 ntBASIC3.33□□□□□ -1.88
SNX3O60493 BEND7P1-201ENST00000422058 457 ntBASIC3.33□□□□□ -1.88
SNX3O60493 DUTP6-201ENST00000425573 462 ntBASIC3.33□□□□□ -1.88
SNX3O60493 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX3O60493 AL590103.1-201ENST00000434488 307 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AL445567.1-201ENST00000439121 144 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX3O60493 NUTF2P3-201ENST00000448540 384 ntBASIC3.33□□□□□ -1.88
SNX3O60493 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX3O60493 AC115115.1-201ENST00000449927 248 ntBASIC3.33□□□□□ -1.88
SNX3O60493 RPL9P32-201ENST00000464118 620 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AL024509.2-201ENST00000493462 493 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AC106872.3-201ENST00000495104 446 ntBASIC3.33□□□□□ -1.88
SNX3O60493 OR2A20P-203ENST00000498397 1268 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AC005178.1-201ENST00000508392 440 ntBASIC3.33□□□□□ -1.88
SNX3O60493 KLHL2P1-201ENST00000508691 521 ntBASIC3.33□□□□□ -1.88
SNX3O60493 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX3O60493 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX3O60493 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX3O60493 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX3O60493 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX3O60493 AP003497.1-201ENST00000528472 562 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AP004247.1-201ENST00000531556 1289 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AC009643.1-201ENST00000532030 391 ntBASIC3.33□□□□□ -1.88
SNX3O60493 CYCSP30-201ENST00000546447 172 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX3O60493 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX3O60493 AC034268.2-201ENST00000571784 482 ntBASIC3.33□□□□□ -1.88
SNX3O60493 MIR4277-201ENST00000578298 84 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AC087499.8-201ENST00000578406 226 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AC011260.1-201ENST00000578420 472 ntBASIC3.33□□□□□ -1.88
SNX3O60493 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX3O60493 MIR4443-201ENST00000585052 53 ntBASIC3.33□□□□□ -1.88
SNX3O60493 CLIC4P2-201ENST00000601934 717 ntBASIC3.33□□□□□ -1.88
SNX3O60493 TUG1_1.1-201ENST00000610654 145 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AL603755.1-201ENST00000619504 163 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AC002550.2-201ENST00000621246 394 ntBASIC3.33□□□□□ -1.88
SNX3O60493 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX3O60493 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX3O60493 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX3O60493 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX3O60493 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX3O60493 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX3O60493 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX3O60493 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNX3O60493 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNX3O60493 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNX3O60493 AL353746.1-201ENST00000566293 6881 ntBASIC3.32□□□□□ -1.88
SNX3O60493 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNX3O60493 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms