Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PPIAP27-201ENST00000453800 265 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 AC023194.2-201ENST00000465398 406 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 RPL21P103-201ENST00000479921 488 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 LSM3P4-201ENST00000502948 309 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 Y_RNA.689-201ENST00000516589 107 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 RN7SL356P-201ENST00000582228 248 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 AC011494.1-201ENST00000596454 237 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 AL161423.1-201ENST00000613700 262 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 BX005214.3-202ENST00000619809 325 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 AC104260.2-201ENST00000623551 3497 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AL022311.1-201ENST00000623726 19416 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 HSPA8P4-201ENST00000511877 1920 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 RNU1-146P-201ENST00000364015 165 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 RN7SKP275-201ENST00000364626 301 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 U3.32-201ENST00000408116 212 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 DPH3P2-201ENST00000422618 250 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AL645568.3-201ENST00000433683 316 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 RPL7L1P1-201ENST00000448259 785 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 CYCSP34-201ENST00000458172 304 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 RPL37P6-201ENST00000460682 294 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC092754.1-201ENST00000472975 479 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC012123.2-201ENST00000485809 248 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC026979.1-201ENST00000492525 396 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 CEACAMP10-202ENST00000495431 496 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC022493.2-201ENST00000506122 481 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 Y_RNA.667-201ENST00000516212 107 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 RNU6-390P-201ENST00000516259 103 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 RN7SKP60-201ENST00000516985 239 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 NRBF2P4-201ENST00000520874 850 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC091516.1-201ENST00000549191 703 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC104695.3-201ENST00000604052 296 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 NUTF2P8-201ENST00000604593 363 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AL121612.2-201ENST00000612261 482 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC109583.2-201ENST00000617367 129 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 AC015914.2-201ENST00000618167 288 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.64□□□□□ -1.67
SHISA3A0PJX4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHISA3A0PJX4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 RNA5SP477-201ENST00000362639 119 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 RNU6-1155P-201ENST00000363554 107 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 SNORA41-201ENST00000384675 132 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms