Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 RNU6-1255P-201ENST00000363434 112 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 RNU6-393P-201ENST00000384475 107 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 Y_RNA.541-201ENST00000384640 113 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC016739.1-201ENST00000405359 345 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 RPL19P1-201ENST00000411635 428 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AL096829.1-201ENST00000413677 457 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 CALM2P2-201ENST00000428512 440 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC016696.1-201ENST00000446949 318 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 RPS23P7-201ENST00000466210 444 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC114982.1-201ENST00000469402 321 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC069499.1-201ENST00000489433 509 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC008958.1-201ENST00000511047 682 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC074133.1-201ENST00000515696 183 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 SCARNA24.2-201ENST00000516968 130 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC025423.5-201ENST00000550230 219 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC005520.5-201ENST00000613926 164 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 TCL6_3.1-201ENST00000619064 137 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 AP000432.2-201ENST00000624164 2048 ntBASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3Q9BZ76 PARP4P2-201ENST00000446672 3326 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RNVU1-6-201ENST00000364688 164 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RNU6-708P-201ENST00000384217 107 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 Y_RNA.458-201ENST00000384240 102 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RNU1-77P-201ENST00000390868 162 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RNU6-131P-201ENST00000391144 107 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RPS29P13-201ENST00000402041 169 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RNU2-15P-201ENST00000410692 191 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 SRRM1P3-201ENST00000426911 2678 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 HAUS6P2-201ENST00000433254 2404 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 AC091179.1-201ENST00000461606 579 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RPL9P9-202ENST00000466501 579 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RN7SL51P-201ENST00000468230 285 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 AC022034.3-201ENST00000471393 478 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RPL30P11-201ENST00000495304 339 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 RBBP4P6-201ENST00000508098 202 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 AC010343.2-201ENST00000510162 224 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 SNORA70.11-201ENST00000515987 138 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 SNORA70.13-201ENST00000516116 138 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 BNIP3P5-201ENST00000562290 498 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 AC136932.1-201ENST00000574771 208 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 MIR4300-201ENST00000581016 96 ntBASIC5.61□□□□□ -1.51
CNTNAP3Q9BZ76 AC068790.4-201ENST00000602474 263 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms