Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 RN7SKP55-201ENST00000364888 307 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 MIR181B1-201ENST00000385240 110 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 AL138479.1-201ENST00000426913 484 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 AL356867.1-201ENST00000429623 299 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 AC073465.2-201ENST00000440938 498 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 RPL30P5-201ENST00000494923 336 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 SNORA18.4-201ENST00000516440 124 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 RNA5SP75-201ENST00000516841 111 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 RNU6-365P-201ENST00000517113 106 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 SSU72P6-201ENST00000532644 488 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 COX6CP16-201ENST00000603667 216 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 AL359922.2-201ENST00000581788 3017 ntBASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHIC1Q5VXU3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 SMG1P6-201ENST00000532337 2930 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 RNU6-1017P-201ENST00000363613 106 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 MICG-208ENST00000416822 132 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 CYP4F29P-201ENST00000420685 446 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 AC012671.1-201ENST00000451912 203 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 RPS29P2-201ENST00000479278 136 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 IGHVII-49-1-201ENST00000521760 224 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 IGKV3-31-201ENST00000523109 329 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 CYCSP39-201ENST00000565821 309 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 MIR6774-201ENST00000614651 70 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 AC008626.2-201ENST00000624425 248 ntBASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHIC1Q5VXU3 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 AC008957.3-201ENST00000624112 2242 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 AC126755.2-208ENST00000327792 462 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 AC138969.1-213ENST00000331436 462 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 RNU6-173P-201ENST00000364215 104 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 SNORA4.2-201ENST00000365313 147 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 Y_RNA.362-201ENST00000365518 110 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 NDUFB4P6-201ENST00000436819 366 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 RN7SL834P-201ENST00000461450 286 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 RPL23AP14-201ENST00000468281 468 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 MIR378H-201ENST00000579966 83 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 CPS1-IT1-201ENST00000628368 2306 ntBASIC11.85□□□□□ -0.51
CHIC1Q5VXU3 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 DEFB108F-201ENST00000344638 222 ntBASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 SNORA63D-201ENST00000364359 132 ntBASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 RN7SKP117-201ENST00000410175 264 ntBASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 RN7SKP30-201ENST00000411373 334 ntBASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 AL354983.1-201ENST00000434580 906 ntBASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 BX323845.2-201ENST00000458382 234 ntBASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 RPL7AP30-201ENST00000482859 796 ntBASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 RPL10P7-201ENST00000495649 625 ntBASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 IGLVV-66-201ENST00000523818 341 ntBASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 AL031777.2-201ENST00000611953 196 ntBASIC11.84□□□□□ -0.51
CHIC1Q5VXU3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms