Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC068647.2-201ENST00000637380 353 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VARS2Q5ST30 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VARS2Q5ST30 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 MAPK10-261ENST00000641050 3109 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 RNA5SP273-201ENST00000362484 113 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 RNA5SP242-201ENST00000364171 118 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 RNU5E-7P-201ENST00000365290 117 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 RNU6-76P-201ENST00000384060 104 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 RNU6-607P-201ENST00000411283 108 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 CTSL3P-202ENST00000412179 788 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 FTLP8-201ENST00000446770 267 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 RNU6-677P-201ENST00000516914 101 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 AC007225.2-201ENST00000562529 256 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 MIR6730-201ENST00000622213 67 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 AC123769.1-201ENST00000530992 3192 ntBASIC6.56□□□□□ -1.36
VARS2Q5ST30 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VARS2Q5ST30 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
VARS2Q5ST30 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 RN7SKP128-201ENST00000364270 303 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 RNU6-294P-201ENST00000364999 102 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 RNU4-17P-201ENST00000365598 141 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 RPS23P10-201ENST00000416185 486 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 NOP56P2-201ENST00000447491 769 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 U8.21-201ENST00000459536 136 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 AC006499.6-201ENST00000511169 607 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 AC107027.2-201ENST00000512197 115 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 Y_RNA.667-201ENST00000516212 107 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 RNU6-762P-201ENST00000517107 102 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 AC022616.8-201ENST00000533569 253 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 AL049767.1-202ENST00000637826 242 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 AC022905.1-201ENST00000503430 3048 ntBASIC6.55□□□□□ -1.36
VARS2Q5ST30 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
VARS2Q5ST30 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARS2Q5ST30 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
VARS2Q5ST30 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VARS2Q5ST30 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms