Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF3O43395 AC079089.3-201ENST00000603094 673 ntBASIC4.6□□□□□ -1.67
PRPF3O43395 AC012669.1-201ENST00000603209 283 ntBASIC4.6□□□□□ -1.67
PRPF3O43395 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF3O43395 AL590282.1-201ENST00000610379 1136 ntBASIC4.6□□□□□ -1.67
PRPF3O43395 AC131902.3-201ENST00000611767 581 ntBASIC4.6□□□□□ -1.67
PRPF3O43395 AC009159.1-201ENST00000618386 642 ntBASIC4.6□□□□□ -1.67
PRPF3O43395 AL159972.1-201ENST00000625150 448 ntBASIC4.6□□□□□ -1.67
PRPF3O43395 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF3O43395 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
PRPF3O43395 TEX21P-201ENST00000447107 1476 ntBASIC4.6□□□□□ -1.67
PRPF3O43395 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF3O43395 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF3O43395 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF3O43395 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF3O43395 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF3O43395 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PRPF3O43395 MAPK10-253ENST00000641010 4072 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 SPRR2C-201ENST00000290702 219 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 RNA5SP502-201ENST00000362694 119 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 SNORA40.3-201ENST00000390964 122 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF3O43395 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.59□□□□□ -1.67
PRPF3O43395 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF3O43395 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF3O43395 AC004975.1-201ENST00000428733 208 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF3O43395 HMGB1P37-201ENST00000439613 609 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.59□□□□□ -1.67
PRPF3O43395 USP9YP29-201ENST00000445112 563 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 HSFY6P-201ENST00000445573 403 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 NUTF2P7-201ENST00000453086 375 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PRPF3O43395 RPL21P104-201ENST00000464143 478 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 ACTR3P3-201ENST00000480448 893 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF3O43395 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF3O43395 AC026801.2-201ENST00000515352 425 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 SNORA31.20-201ENST00000517111 133 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 RNA5SP179-201ENST00000517284 121 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.59□□□□□ -1.67
PRPF3O43395 AP002748.2-201ENST00000528671 348 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.59□□□□□ -1.67
PRPF3O43395 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF3O43395 AC007224.1-201ENST00000564410 144 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 AC012213.3-201ENST00000577199 777 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 AC006270.2-201ENST00000578523 652 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 COX6CP3-201ENST00000580869 223 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF3O43395 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF3O43395 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF3O43395 AL139286.1-201ENST00000604465 483 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 AC091167.4-201ENST00000605079 184 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 AC009509.4-201ENST00000619202 509 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 AL590240.3-201ENST00000621416 943 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 AL138713.1-201ENST00000624026 2130 ntBASIC4.59□□□□□ -1.67
PRPF3O43395 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.59□□□□□ -1.67
PRPF3O43395 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PRPF3O43395 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
PRPF3O43395 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PRPF3O43395 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF3O43395 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF3O43395 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF3O43395 FARSBP1-201ENST00000435808 1778 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF3O43395 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 RN7SKP227-201ENST00000364445 330 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 RNU6-1074P-201ENST00000383995 104 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 RNU2-43P-201ENST00000410306 190 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 RNU6-516P-201ENST00000411381 104 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF3O43395 AL117339.2-201ENST00000430475 180 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 KCTD9P3-201ENST00000434597 1169 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF3O43395 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF3O43395 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 AL049734.2-201ENST00000441066 616 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF3O43395 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF3O43395 RNU7-59P-201ENST00000459101 61 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF3O43395 AC103987.1-201ENST00000473394 348 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 AC114967.1-201ENST00000504890 259 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF3O43395 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF3O43395 FTH1P21-201ENST00000512179 511 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.58□□□□□ -1.68
PRPF3O43395 AC087369.1-201ENST00000520775 996 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF3O43395 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF3O43395 RPL21P5-201ENST00000554662 472 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 ZNF519P3-201ENST00000557158 1032 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 UBE2L4-201ENST00000587688 464 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms