Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AC138915.3-201ENST00000562908 1389 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 SNORD113-6-201ENST00000363345 75 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 RN7SKP266-201ENST00000410232 287 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 HMGB3P23-201ENST00000414981 585 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AC007390.1-201ENST00000415722 356 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 SSXP9-201ENST00000417503 292 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 MTCO2P17-201ENST00000424336 677 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 CYCSP4-201ENST00000429682 331 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AL133547.1-201ENST00000448546 220 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 SSXP4-201ENST00000451349 245 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 RN7SL594P-201ENST00000470590 287 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AC034222.1-201ENST00000494052 532 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 RPL7P47-201ENST00000497299 556 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 HMGN1P11-201ENST00000508668 303 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AL359273.1-201ENST00000510918 627 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 MIR6798-201ENST00000612887 67 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 U4.6-201ENST00000621618 127 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AL357559.1-201ENST00000622228 274 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 CR392039.5-201ENST00000623201 510 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 U6.98-201ENST00000637157 84 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AC009093.8-201ENST00000641769 292 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 FRG1CP-201ENST00000358464 769 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 RNU6-744P-201ENST00000365557 107 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 RNU6-1316P-201ENST00000384242 108 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 TPMTP3-201ENST00000411928 735 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC018644.1-201ENST00000429934 551 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 YWHAZP7-201ENST00000436906 631 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 UBE2V1P13-201ENST00000436983 439 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 THAP5P1-201ENST00000439089 262 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AL592447.1-201ENST00000447592 540 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 U3.44-201ENST00000458938 192 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 SNORA3.4-201ENST00000515969 96 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 IGKV2-23-201ENST00000518729 323 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC068587.4-201ENST00000533893 186 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 DUXAP6-201ENST00000553858 601 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC034105.4-201ENST00000568304 277 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 MIR4474-201ENST00000579189 78 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC067852.3-201ENST00000589177 561 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AL158211.4-201ENST00000606988 584 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC034229.4-201ENST00000607861 441 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC072039.2-201ENST00000608883 439 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AL356863.1-201ENST00000623378 1080 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC079597.1-201ENST00000624306 508 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AL159972.1-201ENST00000625150 448 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 ZNF807-201ENST00000328088 1707 ntBASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
BLOC1S4Q9NUP1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
BLOC1S4Q9NUP1 AC092326.2-201ENST00000624772 1561 ntBASIC3.93□□□□□ -1.78
BLOC1S4Q9NUP1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms