Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 RN7SL25P-201ENST00000583862 260 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 AL162431.4-201ENST00000604674 411 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 AL513218.1-201ENST00000606527 391 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 RN7SL778P-201ENST00000607160 297 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 AC024581.2-201ENST00000619986 252 ntBASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
FOXD4L1Q9NU39 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 U3.19-201ENST00000390893 196 ntBASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 RNU6ATAC19P-201ENST00000408096 110 ntBASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 RPL7AP71-201ENST00000451120 739 ntBASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 RPS28P1-201ENST00000604589 187 ntBASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 AL356157.2-201ENST00000605122 111 ntBASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 AC069294.1-201ENST00000608397 350 ntBASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 uc_338.37-201ENST00000620113 186 ntBASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 AK9-203ENST00000368948 2478 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 AC129502.1-201ENST00000623261 1654 ntBASIC8.18□□□□□ -1.1
FOXD4L1Q9NU39 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 Y_RNA.498-201ENST00000384460 102 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AL355433.1-201ENST00000422804 300 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AL356867.1-201ENST00000429623 299 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 HIST1H2APS6-201ENST00000448609 364 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 Y_RNA.637-201ENST00000459424 114 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 RN7SL213P-201ENST00000463482 317 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 RN7SL282P-201ENST00000479676 297 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 Y_RNA.709-201ENST00000516952 92 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AP006587.5-201ENST00000532033 739 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC018448.1-201ENST00000552843 316 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AL591767.3-201ENST00000554632 525 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC090877.1-201ENST00000561418 344 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC005332.4-201ENST00000592752 579 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC008385.1-201ENST00000604421 355 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC004467.1-201ENST00000615678 330 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 AL354718.1-201ENST00000619764 589 ntBASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
FOXD4L1Q9NU39 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 LCOR-201ENST00000286067 4542 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 RNU6-873P-201ENST00000363833 107 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 AC092066.1-201ENST00000425131 317 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 AL604028.2-201ENST00000437848 788 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 AC068522.1-201ENST00000482895 345 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 AC097263.1-201ENST00000496795 606 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 RNA5SP76-201ENST00000516277 87 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms