Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SNORD62.1-201ENST00000362541 86 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 U3.2-201ENST00000362981 210 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 RNU6-263P-201ENST00000363811 107 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 SNORA23-201ENST00000365128 182 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX5Q8N196 RNU6-306P-201ENST00000384617 107 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 RNU6-95P-201ENST00000384697 107 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 Y_RNA.574-201ENST00000384766 95 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 AC110754.1-201ENST00000399740 601 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 AL445189.1-201ENST00000405722 338 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.77□□□□□ -1.49
SIX5Q8N196 AC016397.1-201ENST00000412463 242 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 FAR2P2-201ENST00000413041 594 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 VTI1BP4-201ENST00000427516 527 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 HIGD1AP11-201ENST00000438361 280 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.77□□□□□ -1.49
SIX5Q8N196 AL359672.1-201ENST00000442302 409 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.77□□□□□ -1.49
SIX5Q8N196 HMGB3P30-201ENST00000457863 606 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 RPS29P22-201ENST00000472363 168 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 AC092451.1-201ENST00000480211 153 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.77□□□□□ -1.49
SIX5Q8N196 AC110794.1-201ENST00000505816 425 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 AC022493.2-201ENST00000506122 481 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 AC021146.3-201ENST00000511911 260 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX5Q8N196 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 RNU6-352P-201ENST00000516908 107 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 RNU6-264P-201ENST00000517134 104 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.77□□□□□ -1.49
SIX5Q8N196 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIX5Q8N196 AC025423.5-201ENST00000550230 219 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 OR4H6P-201ENST00000563771 921 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 MYL12BP1-201ENST00000569826 507 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 AC006363.1-201ENST00000603806 463 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIX5Q8N196 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.77□□□□□ -1.49
SIX5Q8N196 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX5Q8N196 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIX5Q8N196 AP004607.3-201ENST00000530354 3915 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX5Q8N196 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX5Q8N196 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX5Q8N196 AC005592.1-201ENST00000566527 1640 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.49
SIX5Q8N196 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIX5Q8N196 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
SIX5Q8N196 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIX5Q8N196 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SIX5Q8N196 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIX5Q8N196 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SIX5Q8N196 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.76□□□□□ -1.49
SIX5Q8N196 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIX5Q8N196 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIX5Q8N196 RNU6-238P-201ENST00000363313 106 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 SNORD8-201ENST00000363915 110 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 RNU6-99P-201ENST00000364721 107 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 Y_RNA.389-201ENST00000383924 113 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 RNU6-1222P-201ENST00000384615 107 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 RNU4-78P-201ENST00000410940 126 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AL354868.1-201ENST00000417077 482 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AC093162.1-201ENST00000419682 124 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 GNG5P5-201ENST00000420444 220 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 SRSF1P1-201ENST00000424058 520 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AC108075.1-201ENST00000424692 529 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AC016027.5-201ENST00000427227 210 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AL669831.1-202ENST00000428504 417 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 USP9YP16-201ENST00000430287 407 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.76□□□□□ -1.49
SIX5Q8N196 RPL23AP33-201ENST00000442301 452 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 USP9YP23-201ENST00000455085 407 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 RPL37P6-202ENST00000464216 403 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AC103987.1-201ENST00000473394 348 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AC083982.1-201ENST00000485679 344 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 SNRPCP2-201ENST00000504370 475 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.76□□□□□ -1.49
SIX5Q8N196 AC116655.1-201ENST00000508324 901 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AC104136.1-201ENST00000512969 394 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 FTH1P11-201ENST00000517577 551 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AP006587.4-201ENST00000526053 529 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.76□□□□□ -1.49
SIX5Q8N196 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.76□□□□□ -1.49
SIX5Q8N196 AC004696.1-201ENST00000614345 607 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIX5Q8N196 AC074029.4-201ENST00000624796 1859 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AL158163.1-201ENST00000603915 1649 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 AC018809.2-201ENST00000602436 3823 ntBASIC5.76□□□□□ -1.49
SIX5Q8N196 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SIX5Q8N196 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.76□□□□□ -1.49
SIX5Q8N196 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.76□□□□□ -1.49
SIX5Q8N196 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SIX5Q8N196 SAMMSON-213ENST00000641336 1521 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIX5Q8N196 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SIX5Q8N196 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SIX5Q8N196 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIX5Q8N196 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SIX5Q8N196 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SIX5Q8N196 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms