RNA–Protein interactions for RNA: ENST00000455085.1

USP9YP23-201, Transcript of USP9Y pseudogene 23, humanhuman

BASIC

Gene USP9YP23, Length 407 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP23-201ENST00000455085 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
USP9YP23-201ENST00000455085 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
USP9YP23-201ENST00000455085 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
USP9YP23-201ENST00000455085 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
USP9YP23-201ENST00000455085 FOXD1Q16676 465 aa19.33■□□□□ 0.68
USP9YP23-201ENST00000455085 POTEDQ86YR6 584 aa19.12■□□□□ 0.65
USP9YP23-201ENST00000455085 MSH5O43196 834 aa18.45■□□□□ 0.54
USP9YP23-201ENST00000455085 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
USP9YP23-201ENST00000455085 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
USP9YP23-201ENST00000455085 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
USP9YP23-201ENST00000455085 ADRA2BP18089 450 aa17.39■□□□□ 0.37
USP9YP23-201ENST00000455085 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
USP9YP23-201ENST00000455085 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
USP9YP23-201ENST00000455085 MAPK8IP2Q13387 824 aaPredicted RBP16.16■□□□□ 0.18
USP9YP23-201ENST00000455085 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
USP9YP23-201ENST00000455085 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
USP9YP23-201ENST00000455085 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
USP9YP23-201ENST00000455085 HOXD11P31277 338 aaPredicted RBP15.45■□□□□ 0.06
USP9YP23-201ENST00000455085 C1QBPQ07021 282 aaKnown RBP15.41■□□□□ 0.06
USP9YP23-201ENST00000455085 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
USP9YP23-201ENST00000455085 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
USP9YP23-201ENST00000455085 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
USP9YP23-201ENST00000455085 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
USP9YP23-201ENST00000455085 POTEHQ6S545 545 aa14.86□□□□□ -0.03
USP9YP23-201ENST00000455085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
USP9YP23-201ENST00000455085 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
USP9YP23-201ENST00000455085 DSG3P32926 999 aa14.39□□□□□ -0.11
USP9YP23-201ENST00000455085 CAPN15O75808 1086 aa14.29□□□□□ -0.12
USP9YP23-201ENST00000455085 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.13
USP9YP23-201ENST00000455085 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
USP9YP23-201ENST00000455085 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
USP9YP23-201ENST00000455085 APLP2Q06481 763 aa13.93□□□□□ -0.18
USP9YP23-201ENST00000455085 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
USP9YP23-201ENST00000455085 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
USP9YP23-201ENST00000455085 ABCB7O75027 752 aa13.84□□□□□ -0.19
USP9YP23-201ENST00000455085 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
USP9YP23-201ENST00000455085 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
USP9YP23-201ENST00000455085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
USP9YP23-201ENST00000455085 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
USP9YP23-201ENST00000455085 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
USP9YP23-201ENST00000455085 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
USP9YP23-201ENST00000455085 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
USP9YP23-201ENST00000455085 POLA2Q14181 598 aa13.36□□□□□ -0.27
USP9YP23-201ENST00000455085 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
USP9YP23-201ENST00000455085 PIP4P2Q8N4L2 257 aa13.23□□□□□ -0.29
USP9YP23-201ENST00000455085 KCNA4P22459 653 aa13.22□□□□□ -0.29
USP9YP23-201ENST00000455085 HAX1O00165 279 aa13.19□□□□□ -0.3
USP9YP23-201ENST00000455085 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
USP9YP23-201ENST00000455085 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
USP9YP23-201ENST00000455085 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
USP9YP23-201ENST00000455085 FXR2P51116 673 aaKnown RBP eCLIP13.08□□□□□ -0.32
USP9YP23-201ENST00000455085 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
USP9YP23-201ENST00000455085 OSCARQ8IYS5 282 aa12.93□□□□□ -0.34
USP9YP23-201ENST00000455085 EVX2Q03828 476 aa12.92□□□□□ -0.34
USP9YP23-201ENST00000455085 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
USP9YP23-201ENST00000455085 LHX8Q68G74 356 aa12.75□□□□□ -0.37
USP9YP23-201ENST00000455085 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
USP9YP23-201ENST00000455085 PRKAR2AP13861 404 aaKnown RBP12.67□□□□□ -0.38
USP9YP23-201ENST00000455085 GABBR2O75899 941 aa12.65□□□□□ -0.38
USP9YP23-201ENST00000455085 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
USP9YP23-201ENST00000455085 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
USP9YP23-201ENST00000455085 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
USP9YP23-201ENST00000455085 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
USP9YP23-201ENST00000455085 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
USP9YP23-201ENST00000455085 CLEC11AQ9Y240 323 aa12.53□□□□□ -0.4
USP9YP23-201ENST00000455085 FBLN2P98095 1184 aa12.47□□□□□ -0.41
USP9YP23-201ENST00000455085 PLSCR2Q9NRY7 297 aa12.47□□□□□ -0.41
USP9YP23-201ENST00000455085 CLCN6P51797 869 aa12.37□□□□□ -0.43
USP9YP23-201ENST00000455085 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
USP9YP23-201ENST00000455085 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
USP9YP23-201ENST00000455085 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
USP9YP23-201ENST00000455085 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
USP9YP23-201ENST00000455085 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
USP9YP23-201ENST00000455085 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
USP9YP23-201ENST00000455085 PRR29P0C7W0 189 aa12.26□□□□□ -0.45
USP9YP23-201ENST00000455085 CD44P16070 742 aaKnown RBP12.23□□□□□ -0.45
USP9YP23-201ENST00000455085 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
USP9YP23-201ENST00000455085 DCBLD2Q96PD2 775 aa12.18□□□□□ -0.46
USP9YP23-201ENST00000455085 FARP1Q9Y4F1 1045 aaPredicted RBP12.14□□□□□ -0.47
USP9YP23-201ENST00000455085 ZBTB22O15209 634 aa12.1□□□□□ -0.47
USP9YP23-201ENST00000455085 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP9YP23-201ENST00000455085 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
USP9YP23-201ENST00000455085 POTEMA6NI47 508 aa12.04□□□□□ -0.48
USP9YP23-201ENST00000455085 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
USP9YP23-201ENST00000455085 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
USP9YP23-201ENST00000455085 POTEGQ6S5H5 508 aa11.96□□□□□ -0.49
USP9YP23-201ENST00000455085 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
USP9YP23-201ENST00000455085 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
USP9YP23-201ENST00000455085 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
USP9YP23-201ENST00000455085 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
USP9YP23-201ENST00000455085 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
USP9YP23-201ENST00000455085 MAMSTRQ6ZN01 415 aa11.71□□□□□ -0.53
USP9YP23-201ENST00000455085 PELP1Q8IZL8 1130 aaKnown RBP11.71□□□□□ -0.53
USP9YP23-201ENST00000455085 STAG3Q9UJ98 1225 aa11.71□□□□□ -0.53
USP9YP23-201ENST00000455085 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
USP9YP23-201ENST00000455085 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
USP9YP23-201ENST00000455085 C7P10643 843 aa11.66□□□□□ -0.54
USP9YP23-201ENST00000455085 ASTLQ6HA08 431 aaPredicted RBP11.66□□□□□ -0.54
USP9YP23-201ENST00000455085 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
USP9YP23-201ENST00000455085 LCE2DQ5TA82 110 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms