Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCNN1AP37088 RNU6-190P-201ENST00000384154 102 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 MIR153-1-201ENST00000384914 90 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 SNORD70.1-201ENST00000391007 85 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 AL583834.1-201ENST00000406943 343 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 RN7SKP229-201ENST00000410465 302 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 RNU6-712P-201ENST00000410558 100 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 Y_RNA.646-201ENST00000410980 101 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.64□□□□□ -1.51
SCNN1AP37088 CHEK2P5-201ENST00000423877 246 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 FAR2P4-202ENST00000425399 584 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 OR2AH1P-201ENST00000425717 928 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCNN1AP37088 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.64□□□□□ -1.51
SCNN1AP37088 AC090804.1-201ENST00000448870 490 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.64□□□□□ -1.51
SCNN1AP37088 DYNLL1P5-201ENST00000467158 270 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.64□□□□□ -1.51
SCNN1AP37088 AP002812.1-201ENST00000495378 474 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.64□□□□□ -1.51
SCNN1AP37088 RBBP4P6-201ENST00000508098 202 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 AC002456.2-201ENST00000509356 380 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.64□□□□□ -1.51
SCNN1AP37088 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 RNU6-764P-201ENST00000516396 105 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 RNU6-1213P-201ENST00000517075 94 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.64□□□□□ -1.51
SCNN1AP37088 AP004607.2-201ENST00000533949 322 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.64□□□□□ -1.51
SCNN1AP37088 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.64□□□□□ -1.51
SCNN1AP37088 OR4H12P-201ENST00000556269 907 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 SNORD84-203ENST00000584275 78 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.64□□□□□ -1.51
SCNN1AP37088 AL450472.3-201ENST00000615578 367 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCNN1AP37088 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCNN1AP37088 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCNN1AP37088 BTBD10P1-201ENST00000549824 1352 ntBASIC5.64□□□□□ -1.51
SCNN1AP37088 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SCNN1AP37088 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SCNN1AP37088 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCNN1AP37088 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCNN1AP37088 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.64□□□□□ -1.51
SCNN1AP37088 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SCNN1AP37088 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCNN1AP37088 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.63□□□□□ -1.51
SCNN1AP37088 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCNN1AP37088 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCNN1AP37088 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SCNN1AP37088 AL034549.2-201ENST00000618285 3373 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.63□□□□□ -1.51
SCNN1AP37088 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCNN1AP37088 Y_RNA.47-201ENST00000362697 108 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 RNU1-19P-201ENST00000363306 165 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 Y_RNA.149-201ENST00000363558 117 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 RNU6-1040P-201ENST00000383974 107 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 RNU6-701P-201ENST00000384059 107 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 RNU6-601P-201ENST00000384540 107 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 Y_RNA.557-201ENST00000384680 107 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 RNA5SP339-201ENST00000390987 122 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 AL133388.1-201ENST00000404509 287 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 Y_RNA.618-201ENST00000410949 107 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 HMGB3P2-201ENST00000411913 584 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.63□□□□□ -1.51
SCNN1AP37088 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.63□□□□□ -1.51
SCNN1AP37088 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.63□□□□□ -1.51
SCNN1AP37088 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.63□□□□□ -1.51
SCNN1AP37088 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.63□□□□□ -1.51
SCNN1AP37088 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCNN1AP37088 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.63□□□□□ -1.51
SCNN1AP37088 RPS11P7-201ENST00000442125 465 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 NEFMP1-201ENST00000443423 1006 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.63□□□□□ -1.51
SCNN1AP37088 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.63□□□□□ -1.51
SCNN1AP37088 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.63□□□□□ -1.51
SCNN1AP37088 RN7SL547P-201ENST00000490793 290 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 HMGB1P30-201ENST00000492455 606 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 RN7SL101P-201ENST00000496350 279 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 SNORA31.3-201ENST00000516029 96 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 HMGB1P40-201ENST00000525121 540 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.63□□□□□ -1.51
SCNN1AP37088 HNRNPCP4-201ENST00000571636 900 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 AC067852.3-201ENST00000589177 561 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 AC073539.2-201ENST00000597113 165 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 AC011445.2-201ENST00000599274 173 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 AL670379.4-201ENST00000605279 254 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 DUSP12P1-201ENST00000612874 516 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 SDR42E1P2-201ENST00000614861 481 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 AL049641.1-201ENST00000441055 1948 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 AL049555.1-201ENST00000562834 1933 ntBASIC5.63□□□□□ -1.51
SCNN1AP37088 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCNN1AP37088 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCNN1AP37088 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SCNN1AP37088 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCNN1AP37088 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.63□□□□□ -1.51
SCNN1AP37088 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SCNN1AP37088 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCNN1AP37088 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.62□□□□□ -1.51
SCNN1AP37088 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCNN1AP37088 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms