Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC067747.1-201ENST00000608026 250 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 VIS1.1-201ENST00000610517 203 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 MIR1291-201ENST00000627649 87 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 CYP3A51P-201ENST00000633513 256 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC090897.3-201ENST00000636973 1157 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.42□□□□□ -2.02
HLA-DQB2P05538 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DQB2P05538 RNU6-1077P-201ENST00000410506 102 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 UBE2D3P2-201ENST00000424409 445 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.42□□□□□ -2.02
HLA-DQB2P05538 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AC015724.1-201ENST00000478577 156 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DQB2P05538 SNORA31.1-201ENST00000515993 133 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 SNORA31.5-201ENST00000516190 133 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AC083923.1-201ENST00000523708 376 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AP003385.6-201ENST00000531603 374 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AC092470.1-201ENST00000546187 132 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AC012414.2-201ENST00000559474 187 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AP001029.3-201ENST00000588063 596 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AL645944.1-201ENST00000603857 493 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AC026790.2-201ENST00000606282 430 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 AC004775.1-201ENST00000607389 753 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 STMN1P1-201ENST00000617809 440 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 SCARNA15.3-201ENST00000626315 122 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 SCARNA4.1-201ENST00000628597 123 ntBASIC2.42□□□□□ -2.02
HLA-DQB2P05538 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DQB2P05538 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 RNVU1-3-201ENST00000364313 161 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 RNU1-51P-201ENST00000365345 176 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 RNU6-1226P-201ENST00000384317 107 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 MIR634-201ENST00000385208 97 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 MT-TC-201ENST00000387405 66 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 RNU4-78P-201ENST00000410940 126 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 RAP1BP1-201ENST00000412709 553 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AL096701.2-201ENST00000416920 238 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 FABP5P3-201ENST00000437960 408 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 KC877373.1-201ENST00000479066 408 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 LINC00888-204ENST00000487386 421 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 MTCO3P44-201ENST00000510977 541 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC104057.1-201ENST00000515547 497 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 RNU6-202P-201ENST00000515998 96 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC087276.1-201ENST00000529659 480 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC021269.2-201ENST00000532318 330 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC087481.2-201ENST00000565492 330 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC092474.3-201ENST00000603022 568 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AP000787.2-201ENST00000604432 568 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC135178.6-201ENST00000605314 398 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC046143.2-201ENST00000609789 160 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC091046.2-201ENST00000620775 665 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AP000676.4-201ENST00000624659 623 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AC083865.1-201ENST00000636634 831 ntBASIC2.41□□□□□ -2.02
HLA-DQB2P05538 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HLA-DQB2P05538 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
HLA-DQB2P05538 AC233263.6-201ENST00000631132 1963 ntBASIC2.4□□□□□ -2.02
HLA-DQB2P05538 AC006378.2-201ENST00000623178 2476 ntBASIC2.4□□□□□ -2.03
HLA-DQB2P05538 ANKRD36P1-201ENST00000344424 659 ntBASIC2.4□□□□□ -2.03
HLA-DQB2P05538 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.4□□□□□ -2.03
HLA-DQB2P05538 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DQB2P05538 RNU6-339P-201ENST00000384310 107 ntBASIC2.4□□□□□ -2.03
HLA-DQB2P05538 ARF4P3-201ENST00000397387 509 ntBASIC2.4□□□□□ -2.03
HLA-DQB2P05538 RPS3AP26-201ENST00000398259 784 ntBASIC2.4□□□□□ -2.03
HLA-DQB2P05538 ATF1P1-201ENST00000406040 927 ntBASIC2.4□□□□□ -2.03
HLA-DQB2P05538 MIR1289-1-201ENST00000408836 144 ntBASIC2.4□□□□□ -2.03
HLA-DQB2P05538 AC092745.2-202ENST00000411880 369 ntBASIC2.4□□□□□ -2.03
HLA-DQB2P05538 ATG3P1-201ENST00000419507 911 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms