Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC107214.2-201ENST00000608204 634 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 RNVU1-4-201ENST00000612985 164 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 MIR8058-201ENST00000615737 89 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 AC006338.2-201ENST00000616864 791 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 AC079248.2-201ENST00000623779 326 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 AC099063.3-201ENST00000642066 185 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC136Q96JN2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC136Q96JN2 AC110774.1-201ENST00000623567 2018 ntBASIC4.84□□□□□ -1.64
CCDC136Q96JN2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 RNU6-97P-201ENST00000363387 104 ntBASIC4.83□□□□□ -1.64
CCDC136Q96JN2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 HMGN2P16-201ENST00000456802 261 ntBASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AP001025.2-201ENST00000490908 477 ntBASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 KLKP1-201ENST00000595979 403 ntBASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AC068313.1-201ENST00000604028 1008 ntBASIC4.83□□□□□ -1.64
CCDC136Q96JN2 VIS1.1-201ENST00000610517 203 ntBASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.83□□□□□ -1.64
CCDC136Q96JN2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AC079684.1-201ENST00000621405 437 ntBASIC4.83□□□□□ -1.64
CCDC136Q96JN2 AL356266.1-201ENST00000623311 483 ntBASIC4.83□□□□□ -1.64
CCDC136Q96JN2 PCMTD1P7-201ENST00000634506 357 ntBASIC4.83□□□□□ -1.64
CCDC136Q96JN2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC136Q96JN2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 RNU6-853P-201ENST00000364306 107 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AL049693.1-201ENST00000402760 611 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 RN7SKP285-201ENST00000410137 318 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 RN7SKP266-201ENST00000410232 287 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 SNORA57.3-201ENST00000411095 141 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 RAB28P1-201ENST00000411517 641 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 HMGB1P11-201ENST00000413899 637 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 MTND4P20-201ENST00000424125 869 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 snoU13.4-201ENST00000458916 104 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 RN7SL385P-201ENST00000468873 276 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AP003730.1-201ENST00000524605 285 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AC090888.1-201ENST00000561335 1141 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AC034268.2-201ENST00000571784 482 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AC011260.1-201ENST00000578420 472 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 RN7SL600P-201ENST00000581811 299 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 MIR544B-201ENST00000582372 78 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 AL590392.1-201ENST00000604960 446 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 MIR6716-201ENST00000613413 80 ntBASIC4.82□□□□□ -1.64
CCDC136Q96JN2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC136Q96JN2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 Y_RNA.560-201ENST00000384689 102 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AL049545.1-201ENST00000401856 572 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 MTCO1P17-201ENST00000411522 491 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 RPS15AP38-201ENST00000413110 372 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 Z97055.1-201ENST00000419730 712 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 MTND2P18-201ENST00000419962 1030 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 Z74696.2-201ENST00000436514 498 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 RPS3AP50-201ENST00000487064 803 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AC110792.1-201ENST00000491826 472 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms