Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NUBP1P53384 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.77□□□□□ -1.33
NUBP1P53384 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
NUBP1P53384 AL359693.1-201ENST00000614959 2407 ntBASIC6.77□□□□□ -1.33
NUBP1P53384 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.77□□□□□ -1.33
NUBP1P53384 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
NUBP1P53384 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NUBP1P53384 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
NUBP1P53384 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
NUBP1P53384 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
NUBP1P53384 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 RNU6-1180P-201ENST00000364935 107 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 U3.37-201ENST00000408528 213 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 RPL12P46-201ENST00000436610 195 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 AL161636.2-201ENST00000445179 927 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 VPS25P1-201ENST00000455691 508 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 AC040162.2-201ENST00000573092 157 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 MIR4700-201ENST00000578311 74 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.76□□□□□ -1.33
NUBP1P53384 FKBP1AP1-201ENST00000594588 318 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 AC004805.3-201ENST00000603178 310 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 AC006380.1-201ENST00000603598 186 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC6.76□□□□□ -1.33
NUBP1P53384 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUBP1P53384 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.76□□□□□ -1.33
NUBP1P53384 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
NUBP1P53384 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
NUBP1P53384 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.76□□□□□ -1.33
NUBP1P53384 MTND5P35-201ENST00000557537 1720 ntBASIC6.76□□□□□ -1.33
NUBP1P53384 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.75□□□□□ -1.33
NUBP1P53384 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC6.75□□□□□ -1.33
NUBP1P53384 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUBP1P53384 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
NUBP1P53384 RNU6-873P-201ENST00000363833 107 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 RNA5SP172-201ENST00000365061 118 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
NUBP1P53384 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
NUBP1P53384 MIR626-201ENST00000385032 94 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NUBP1P53384 RNU2-68P-201ENST00000410878 191 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 RNU6-1199P-201ENST00000411249 104 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 AC112220.1-201ENST00000434628 355 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC6.75□□□□□ -1.33
NUBP1P53384 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 RPL23AP28-201ENST00000448062 470 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.75□□□□□ -1.33
NUBP1P53384 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC6.75□□□□□ -1.33
NUBP1P53384 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC6.75□□□□□ -1.33
NUBP1P53384 SNORD46.2-201ENST00000516021 102 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.75□□□□□ -1.33
NUBP1P53384 AP004607.1-201ENST00000524456 203 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 AC140063.1-201ENST00000541343 259 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC6.75□□□□□ -1.33
NUBP1P53384 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC6.75□□□□□ -1.33
NUBP1P53384 AL589674.2-201ENST00000604304 337 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
NUBP1P53384 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUBP1P53384 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NUBP1P53384 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUBP1P53384 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUBP1P53384 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
NUBP1P53384 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.75□□□□□ -1.33
NUBP1P53384 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUBP1P53384 AL355834.1-201ENST00000556602 3965 ntBASIC6.75□□□□□ -1.33
NUBP1P53384 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUBP1P53384 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
NUBP1P53384 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC6.74□□□□□ -1.33
NUBP1P53384 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.74□□□□□ -1.33
NUBP1P53384 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC6.74□□□□□ -1.33
NUBP1P53384 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
NUBP1P53384 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
NUBP1P53384 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NUBP1P53384 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NUBP1P53384 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
NUBP1P53384 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.74□□□□□ -1.33
NUBP1P53384 snoU2_19.4-201ENST00000364329 80 ntBASIC6.74□□□□□ -1.33
NUBP1P53384 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NUBP1P53384 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NUBP1P53384 AL929472.1-201ENST00000417484 429 ntBASIC6.74□□□□□ -1.33
NUBP1P53384 AC018645.1-201ENST00000505003 109 ntBASIC6.74□□□□□ -1.33
NUBP1P53384 AC083906.1-201ENST00000509298 406 ntBASIC6.74□□□□□ -1.33
NUBP1P53384 RNA5SP287-201ENST00000516358 103 ntBASIC6.74□□□□□ -1.33
NUBP1P53384 RNA5SP291-201ENST00000517222 105 ntBASIC6.74□□□□□ -1.33
NUBP1P53384 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms