Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 Y_RNA.38-201ENST00000362617 102 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 RN7SKP185-201ENST00000362813 326 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 RNA5SP72-201ENST00000364442 117 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 Y_RNA.372-201ENST00000365599 102 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 U3.20-201ENST00000390909 217 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 SDHCP2-201ENST00000398565 501 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 CCNG1P1-201ENST00000406783 885 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 HMGB3P23-201ENST00000414981 585 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 MTND4LP10-201ENST00000435146 291 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AL022238.1-201ENST00000442557 355 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC244505.5-201ENST00000443639 207 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 PSPHP1-201ENST00000450062 261 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AL049873.1-201ENST00000480540 376 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 MTCO2P30-201ENST00000503662 364 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 OR4P1P-201ENST00000530808 1136 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 SETP7-201ENST00000552169 453 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 TVP23BP1-201ENST00000557500 617 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC093249.4-201ENST00000564755 259 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC137800.2-201ENST00000574375 120 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC090616.5-202ENST00000582111 297 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC087045.1-201ENST00000605856 382 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC116312.1-201ENST00000606841 314 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AC011816.2-201ENST00000607089 556 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 OR10AB1P-201ENST00000609613 938 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AL158209.2-201ENST00000619266 216 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 MIR6839-201ENST00000620425 113 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AL359697.1-201ENST00000624879 587 ntBASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
LRFN3Q9BTN0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AL136964.1-201ENST00000622038 2990 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 MTND5P1-201ENST00000445440 1375 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 SNORA70.6-201ENST00000383934 134 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 RNU6-876P-201ENST00000391295 104 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 FCF1P10-201ENST00000407590 479 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 RNU6-248P-201ENST00000410720 107 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 RNU2-8P-201ENST00000410727 190 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC073614.1-201ENST00000438690 650 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 RABEPKP1-201ENST00000440529 1026 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 ABCF2P2-201ENST00000450549 296 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AL353691.1-201ENST00000451332 387 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC053481.1-201ENST00000467217 306 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 RPS29P2-201ENST00000479278 136 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC008958.1-201ENST00000511047 682 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC074250.1-201ENST00000511117 192 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC010342.1-201ENST00000514047 877 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AP003467.2-201ENST00000520175 319 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms