Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AP000936.2-201ENST00000447151 681 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 AL162388.1-201ENST00000450912 352 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 DNAJC19P1-201ENST00000455312 319 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 HMGB1P25-201ENST00000468402 607 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN2P57739 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN2P57739 AC012170.1-201ENST00000495139 359 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN2P57739 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN2P57739 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN2P57739 MTND3P5-201ENST00000512798 333 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 RNU1-95P-201ENST00000516357 160 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 RNU1-128P-201ENST00000516704 160 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN2P57739 PAICSP4-201ENST00000517543 1253 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN2P57739 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN2P57739 AC007991.1-201ENST00000522680 631 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 MTND4LP18-201ENST00000526864 291 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN2P57739 RFPL1S-203ENST00000539579 330 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN2P57739 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN2P57739 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN2P57739 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
CLDN2P57739 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN2P57739 AC090616.5-202ENST00000582111 297 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 AC119751.7-201ENST00000600494 245 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 AC091965.4-201ENST00000607691 587 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 AC027807.2-201ENST00000616099 408 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 AC009237.17-201ENST00000618111 748 ntBASIC3.83□□□□□ -1.8
CLDN2P57739 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN2P57739 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLDN2P57739 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 AC087190.4-201ENST00000574616 8334 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN2P57739 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLDN2P57739 RNU6-97P-201ENST00000363387 104 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 Y_RNA.194-201ENST00000363985 102 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 RNU6-853P-201ENST00000364306 107 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN2P57739 RNU6-1207P-201ENST00000384343 107 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 RNU4-78P-201ENST00000410940 126 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN2P57739 RPL21P32-201ENST00000419877 477 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 AL391219.1-201ENST00000422570 483 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 AL591419.1-201ENST00000427423 339 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 AC091286.1-201ENST00000431233 461 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 HMGB1P37-201ENST00000439613 609 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 MTCO1P19-201ENST00000443487 500 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 SSXP1-201ENST00000453640 473 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 BTF3P5-201ENST00000457252 467 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN2P57739 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 PRELID3BP7-201ENST00000503606 469 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 CBX3P3-201ENST00000508108 532 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 Y_RNA.655-201ENST00000515919 96 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 RNA5SP154-201ENST00000516193 111 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN2P57739 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN2P57739 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN2P57739 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN2P57739 AC006362.1-201ENST00000567392 174 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 AC011816.2-201ENST00000607089 556 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 AC244100.1-202ENST00000621554 382 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN2P57739 AL034408.1-202ENST00000636088 415 ntBASIC3.82□□□□□ -1.8
CLDN2P57739 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLDN2P57739 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN2P57739 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN2P57739 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CLDN2P57739 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 CCT4P2-201ENST00000233836 1548 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN2P57739 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 RHOT1P2-201ENST00000366423 333 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 SNORA5A-201ENST00000384111 134 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 RPL21P17-201ENST00000397467 475 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 RN7SKP56-201ENST00000410513 331 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC093578.1-201ENST00000415219 368 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 MTCO2P34-201ENST00000421994 607 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN2P57739 YME1L1P1-201ENST00000429435 297 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms