Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC007336.1-201ENST00000576365 3828 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CISHQ9NSE2 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
CISHQ9NSE2 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
CISHQ9NSE2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CISHQ9NSE2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.55□□□□□ -2
CISHQ9NSE2 SNORA67.4-201ENST00000384688 142 ntBASIC2.55□□□□□ -2
CISHQ9NSE2 FAT1P1-201ENST00000406588 507 ntBASIC2.55□□□□□ -2
CISHQ9NSE2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
CISHQ9NSE2 RNU6-564P-201ENST00000410983 104 ntBASIC2.55□□□□□ -2
CISHQ9NSE2 NANOGP5-201ENST00000424456 877 ntBASIC2.55□□□□□ -2
CISHQ9NSE2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.55□□□□□ -2
CISHQ9NSE2 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.55□□□□□ -2
CISHQ9NSE2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.55□□□□□ -2
CISHQ9NSE2 AC069306.1-201ENST00000507006 843 ntBASIC2.55□□□□□ -2
CISHQ9NSE2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.55□□□□□ -2
CISHQ9NSE2 AC234781.5-201ENST00000508429 271 ntBASIC2.55□□□□□ -2
CISHQ9NSE2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.55□□□□□ -2
CISHQ9NSE2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.55□□□□□ -2
CISHQ9NSE2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.55□□□□□ -2
CISHQ9NSE2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.55□□□□□ -2
CISHQ9NSE2 AC073387.2-201ENST00000604797 784 ntBASIC2.55□□□□□ -2
CISHQ9NSE2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.55□□□□□ -2
CISHQ9NSE2 AC090897.3-201ENST00000636973 1157 ntBASIC2.55□□□□□ -2
CISHQ9NSE2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CISHQ9NSE2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CISHQ9NSE2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CISHQ9NSE2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
CISHQ9NSE2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.54□□□□□ -2
CISHQ9NSE2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.54□□□□□ -2
CISHQ9NSE2 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CISHQ9NSE2 METTL21EP-201ENST00000298105 713 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 RPS3AP26-201ENST00000398259 784 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 MTATP6P31-201ENST00000406985 692 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.54□□□□□ -2
CISHQ9NSE2 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.54□□□□□ -2
CISHQ9NSE2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.54□□□□□ -2
CISHQ9NSE2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.54□□□□□ -2
CISHQ9NSE2 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.54□□□□□ -2
CISHQ9NSE2 HMGB1P15-201ENST00000453854 435 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 AL035407.2-201ENST00000454090 378 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 SUMO1P1-201ENST00000497904 306 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 AC008494.2-201ENST00000514544 370 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 SNORA31.1-201ENST00000515993 133 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 SNORA31.5-201ENST00000516190 133 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.54□□□□□ -2
CISHQ9NSE2 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.54□□□□□ -2
CISHQ9NSE2 AC021269.2-201ENST00000532318 330 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.54□□□□□ -2
CISHQ9NSE2 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.54□□□□□ -2
CISHQ9NSE2 AC074029.2-201ENST00000551045 634 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 AC090751.1-201ENST00000566966 267 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 AC012182.1-201ENST00000570133 895 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 AC046143.2-201ENST00000609789 160 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.54□□□□□ -2
CISHQ9NSE2 AC024023.1-201ENST00000624530 922 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 AP000676.4-201ENST00000624659 623 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.54□□□□□ -2
CISHQ9NSE2 CYP3A51P-201ENST00000633513 256 ntBASIC2.54□□□□□ -2
CISHQ9NSE2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.53□□□□□ -2
CISHQ9NSE2 AL136520.1-201ENST00000600311 1322 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 RNU6-819P-201ENST00000364116 107 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 MIR421-201ENST00000365696 85 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 SNORA36C-201ENST00000384289 132 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 MIR887-201ENST00000401258 79 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 RNU4-65P-201ENST00000410473 140 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.53□□□□□ -2
CISHQ9NSE2 USP9YP36-201ENST00000424581 829 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 AL121578.1-201ENST00000428051 892 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.53□□□□□ -2
CISHQ9NSE2 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.53□□□□□ -2
CISHQ9NSE2 AL445669.2-201ENST00000454425 421 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.53□□□□□ -2
CISHQ9NSE2 RN7SL636P-201ENST00000497504 294 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 AC025459.1-201ENST00000504072 156 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CISHQ9NSE2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.53□□□□□ -2
CISHQ9NSE2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.53□□□□□ -2
CISHQ9NSE2 AC027309.2-201ENST00000520566 192 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.53□□□□□ -2
CISHQ9NSE2 CIR1P1-201ENST00000524055 1133 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 AC004923.2-201ENST00000529649 369 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.53□□□□□ -2
CISHQ9NSE2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.53□□□□□ -2
CISHQ9NSE2 VIS1.1-201ENST00000610517 203 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 VN1R7P-201ENST00000619242 903 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.53□□□□□ -2
CISHQ9NSE2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.52□□□□□ -2.01
CISHQ9NSE2 SNORA14A-201ENST00000364773 135 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CISHQ9NSE2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.52□□□□□ -2.01
CISHQ9NSE2 MIR1250-201ENST00000408098 113 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 SSXP9-201ENST00000417503 292 ntBASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.52□□□□□ -2.01
CISHQ9NSE2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.52□□□□□ -2.01
CISHQ9NSE2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.52□□□□□ -2.01
CISHQ9NSE2 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms