Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 XKRY-201ENST00000510392 1100 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC012360.2-201ENST00000609349 391 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AL359740.1-201ENST00000624340 592 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 U8.8-201ENST00000365399 135 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 RPS7P5-201ENST00000441482 581 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 MIR4452-201ENST00000583004 71 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 MIR6515-201ENST00000619843 57 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 MIR96-201ENST00000362288 78 ntBASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 AL354719.1-201ENST00000406535 843 ntBASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 RPS24P8-201ENST00000431490 402 ntBASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 AL353597.2-202ENST00000434901 373 ntBASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 AL137159.1-201ENST00000452808 512 ntBASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 KPNA2P1-201ENST00000458289 1591 ntBASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 MTND5P12-201ENST00000502851 1449 ntBASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 AL160237.3-201ENST00000604114 1013 ntBASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 MIR6766-201ENST00000622641 72 ntBASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 MTND5P27-201ENST00000428871 1720 ntBASIC1.76□□□□□ -2.13
CSMD1Q96PZ7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 OR5H15-201ENST00000383696 930 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AL021407.1-201ENST00000404531 386 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 SDCBPP3-201ENST00000419629 891 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 OR4P1P-201ENST00000530808 1136 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AC002076.2-201ENST00000617362 122 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AL445437.1-201ENST00000623157 3087 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 SNORD114-22-201ENST00000365423 72 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 RNU1-138P-201ENST00000384093 164 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AL358453.1-201ENST00000422522 250 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AC092185.1-201ENST00000491371 97 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 OR52A4P-203ENST00000498233 1014 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AL845331.3-202ENST00000562856 261 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 CYP3A51P-201ENST00000633513 256 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 CU459211.1-201ENST00000635667 749 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 MTND5P35-201ENST00000557537 1720 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 RPS3AP9-201ENST00000417027 792 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AL358075.3-201ENST00000426289 226 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 FO393414.1-201ENST00000428697 1184 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 GAPDHP27-201ENST00000447427 1020 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AC092155.2-201ENST00000454675 477 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 LINC00888-204ENST00000487386 421 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AC105137.2-201ENST00000569073 466 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 AC010872.1-201ENST00000624225 675 ntBASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD1Q96PZ7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 RPL21P18-201ENST00000469899 480 ntBASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 AC090543.1-201ENST00000492168 485 ntBASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 OR4R2P-201ENST00000530815 597 ntBASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 RPL36AP33-201ENST00000450395 310 ntBASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 AL133412.1-201ENST00000380194 2992 ntBASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 RNA5SP296-201ENST00000410523 111 ntBASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 MUPP-201ENST00000438111 566 ntBASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 CACYBPP1-201ENST00000438592 684 ntBASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 AC140059.1-201ENST00000489238 361 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms