Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC105402.2-201ENST00000438503 358 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 AC016691.1-201ENST00000441321 413 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 HMGB3P9-201ENST00000441799 583 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 MTCYBP6-201ENST00000441810 138 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 PHBP16-201ENST00000446318 950 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 PTMAP3-201ENST00000447474 330 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 RPS27AP17-201ENST00000463344 455 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 SNORD116-26-201ENST00000516006 96 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 SNORA40.12-201ENST00000516329 111 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 RN7SKP82-201ENST00000516786 223 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 AC022861.1-201ENST00000522981 663 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 CYCSP28-201ENST00000534284 321 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 Z84480.1-201ENST00000605131 311 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 AL023881.1-201ENST00000621088 301 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 RMST_7.1-201ENST00000621935 268 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 U3.53-201ENST00000628922 216 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 MIR1302-1-201ENST00000637932 143 ntBASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM7Q9NR12 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AL672167.1-204ENST00000641875 3017 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 RNU4-1-201ENST00000363925 141 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 RNU1-13P-201ENST00000384499 162 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 RNU6-441P-201ENST00000384545 106 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AC016769.3-201ENST00000396562 315 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AL162578.1-201ENST00000406202 378 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 RNU2-9P-201ENST00000410194 145 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 MTND2P23-201ENST00000422990 651 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 SAR1AP4-201ENST00000429225 591 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 RPL12P18-201ENST00000437175 325 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 RPS15AP9-201ENST00000439856 381 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AC025164.1-201ENST00000496249 478 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 RNU6-277P-201ENST00000516272 106 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 RNU7-30P-201ENST00000516835 62 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 OR5B19P-201ENST00000531766 928 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AC068446.3-201ENST00000555285 382 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 IPO5P1-202ENST00000600039 287 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AP000942.4-201ENST00000604811 241 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AL133255.1-201ENST00000606374 441 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AL391813.2-201ENST00000609113 322 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AC107081.3-201ENST00000612715 2034 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
PDLIM7Q9NR12 AL445487.1-201ENST00000415694 1580 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 Y_RNA.138-201ENST00000363462 102 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 SNORA51.6-201ENST00000384151 125 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 RNU6-74P-201ENST00000384235 107 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 MIR649-201ENST00000384843 97 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 MIR659-201ENST00000384963 97 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 RNA5SP317-201ENST00000410176 116 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 RNA5SP311-201ENST00000411290 116 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms