Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 PHF2P2-202ENST00000444553 2865 ntBASIC7.76□□□□□ -1.17
RNF39Q9H2S5 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 RNU6-166P-201ENST00000384371 107 ntBASIC7.76□□□□□ -1.17
RNF39Q9H2S5 RNU6-1055P-201ENST00000391085 107 ntBASIC7.76□□□□□ -1.17
RNF39Q9H2S5 RN7SL325P-201ENST00000460434 283 ntBASIC7.76□□□□□ -1.17
RNF39Q9H2S5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC7.76□□□□□ -1.17
RNF39Q9H2S5 SNORA31.19-201ENST00000517079 126 ntBASIC7.76□□□□□ -1.17
RNF39Q9H2S5 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 AP001781.1-201ENST00000530977 207 ntBASIC7.76□□□□□ -1.17
RNF39Q9H2S5 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 AL049861.1-201ENST00000603130 150 ntBASIC7.76□□□□□ -1.17
RNF39Q9H2S5 MIR665-201ENST00000635949 72 ntBASIC7.76□□□□□ -1.17
RNF39Q9H2S5 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF39Q9H2S5 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 Y_RNA.96-201ENST00000363092 109 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 RNU6-1209P-201ENST00000363655 107 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 RN7SKP107-201ENST00000364157 290 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 RN7SKP55-201ENST00000364888 307 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 MIR548D2-201ENST00000384955 97 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 MIR187-201ENST00000385062 109 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 RNA5SP53-201ENST00000391299 120 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 RNA5SP241-201ENST00000391326 114 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 RNU2-43P-201ENST00000410306 190 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 AL513331.1-201ENST00000411908 397 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 RPS26P42-201ENST00000413485 326 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 AL391219.1-201ENST00000422570 483 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 MTND6P12-201ENST00000428247 522 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 AL034399.1-201ENST00000451535 380 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 RN7SL868P-201ENST00000485915 303 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 RN7SL655P-201ENST00000486087 298 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 AL049874.1-201ENST00000489560 388 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 OR5M6P-201ENST00000530227 937 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 AC105245.1-201ENST00000581934 244 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.75□□□□□ -1.17
RNF39Q9H2S5 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF39Q9H2S5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 RNU4-41P-201ENST00000364426 143 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 U1.1-201ENST00000384101 164 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 SNORA36A-201ENST00000384221 132 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 MIR99A-201ENST00000384906 81 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 RNA5SP280-201ENST00000411230 115 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 ANKRD54P1-201ENST00000433115 471 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 RN7SL849P-201ENST00000485236 295 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 SNORD77.4-201ENST00000516158 81 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF39Q9H2S5 AL365205.2-201ENST00000594586 68 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 RPL12P48-201ENST00000605620 304 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 AC015914.2-201ENST00000618167 288 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 AC027309.3-201ENST00000623419 351 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 AC008626.2-201ENST00000624425 248 ntBASIC7.74□□□□□ -1.17
RNF39Q9H2S5 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms