Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.48□□□□□ -1.85
TOP1P11387 AC108729.2-201ENST00000476543 840 ntBASIC3.48□□□□□ -1.85
TOP1P11387 AC006483.1-201ENST00000487308 313 ntBASIC3.48□□□□□ -1.85
TOP1P11387 AC008628.1-201ENST00000508663 265 ntBASIC3.48□□□□□ -1.85
TOP1P11387 POU5F1P7-201ENST00000508759 541 ntBASIC3.48□□□□□ -1.85
TOP1P11387 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.48□□□□□ -1.85
TOP1P11387 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.48□□□□□ -1.85
TOP1P11387 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.48□□□□□ -1.85
TOP1P11387 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.48□□□□□ -1.85
TOP1P11387 AC087481.2-201ENST00000565492 330 ntBASIC3.48□□□□□ -1.85
TOP1P11387 AC055876.1-202ENST00000567053 138 ntBASIC3.48□□□□□ -1.85
TOP1P11387 SNORD84-203ENST00000584275 78 ntBASIC3.48□□□□□ -1.85
TOP1P11387 BDH2P1-201ENST00000602288 736 ntBASIC3.48□□□□□ -1.85
TOP1P11387 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.48□□□□□ -1.85
TOP1P11387 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TOP1P11387 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TOP1P11387 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
TOP1P11387 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.47□□□□□ -1.85
TOP1P11387 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TOP1P11387 DYNLT3P1-201ENST00000378574 347 ntBASIC3.47□□□□□ -1.85
TOP1P11387 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TOP1P11387 RPL5P18-201ENST00000406671 891 ntBASIC3.47□□□□□ -1.85
TOP1P11387 PTGES3P2-201ENST00000407942 482 ntBASIC3.47□□□□□ -1.85
TOP1P11387 RN7SKP58-201ENST00000411010 305 ntBASIC3.47□□□□□ -1.85
TOP1P11387 RPL7P8-201ENST00000411964 730 ntBASIC3.47□□□□□ -1.85
TOP1P11387 OR4K6P-201ENST00000416478 897 ntBASIC3.47□□□□□ -1.85
TOP1P11387 MRPL50P2-201ENST00000416821 482 ntBASIC3.47□□□□□ -1.85
TOP1P11387 SDCBPP3-201ENST00000419629 891 ntBASIC3.47□□□□□ -1.85
TOP1P11387 RPL21P32-201ENST00000419877 477 ntBASIC3.47□□□□□ -1.85
TOP1P11387 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.47□□□□□ -1.85
TOP1P11387 DPPA2P1-201ENST00000428060 556 ntBASIC3.47□□□□□ -1.85
TOP1P11387 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.47□□□□□ -1.85
TOP1P11387 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.47□□□□□ -1.85
TOP1P11387 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.47□□□□□ -1.85
TOP1P11387 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.47□□□□□ -1.85
TOP1P11387 GAPDHP39-201ENST00000481866 979 ntBASIC3.47□□□□□ -1.85
TOP1P11387 AC118282.1-201ENST00000506408 765 ntBASIC3.47□□□□□ -1.85
TOP1P11387 AC119751.1-201ENST00000513357 765 ntBASIC3.47□□□□□ -1.85
TOP1P11387 RNU6-1102P-201ENST00000516149 96 ntBASIC3.47□□□□□ -1.85
TOP1P11387 OR5G4P-201ENST00000525251 760 ntBASIC3.47□□□□□ -1.85
TOP1P11387 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TOP1P11387 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.47□□□□□ -1.85
TOP1P11387 EIF4BP1-201ENST00000554881 351 ntBASIC3.47□□□□□ -1.85
TOP1P11387 AC095057.3-201ENST00000567102 1157 ntBASIC3.47□□□□□ -1.85
TOP1P11387 VN1R92P-201ENST00000598511 928 ntBASIC3.47□□□□□ -1.85
TOP1P11387 AC025588.3-201ENST00000604182 274 ntBASIC3.47□□□□□ -1.85
TOP1P11387 AC096586.1-201ENST00000610267 561 ntBASIC3.47□□□□□ -1.85
TOP1P11387 AC090116.1-201ENST00000615679 446 ntBASIC3.47□□□□□ -1.85
TOP1P11387 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.47□□□□□ -1.85
TOP1P11387 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TOP1P11387 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
TOP1P11387 MAPK10-322ENST00000641485 4530 ntBASIC3.47□□□□□ -1.85
TOP1P11387 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
TOP1P11387 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TOP1P11387 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TOP1P11387 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.46□□□□□ -1.86
TOP1P11387 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TOP1P11387 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TOP1P11387 RNU6-989P-201ENST00000362756 107 ntBASIC3.46□□□□□ -1.86
TOP1P11387 SNORA51.4-201ENST00000364993 124 ntBASIC3.46□□□□□ -1.86
TOP1P11387 MTND4LP20-201ENST00000402379 270 ntBASIC3.46□□□□□ -1.86
TOP1P11387 EEF1A1P41-201ENST00000414667 207 ntBASIC3.46□□□□□ -1.86
TOP1P11387 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.46□□□□□ -1.86
TOP1P11387 RPL7P46-201ENST00000425129 740 ntBASIC3.46□□□□□ -1.86
TOP1P11387 DUTP6-201ENST00000425573 462 ntBASIC3.46□□□□□ -1.86
TOP1P11387 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.46□□□□□ -1.86
TOP1P11387 UBE2V1P6-201ENST00000430840 422 ntBASIC3.46□□□□□ -1.86
TOP1P11387 AL139132.1-201ENST00000431587 344 ntBASIC3.46□□□□□ -1.86
TOP1P11387 OR2B8P-201ENST00000432841 938 ntBASIC3.46□□□□□ -1.86
TOP1P11387 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.46□□□□□ -1.86
TOP1P11387 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.46□□□□□ -1.86
TOP1P11387 TRIM60P18-201ENST00000441518 828 ntBASIC3.46□□□□□ -1.86
TOP1P11387 HMGB1P25-201ENST00000468402 607 ntBASIC3.46□□□□□ -1.86
TOP1P11387 RPS29P26-201ENST00000477483 171 ntBASIC3.46□□□□□ -1.86
TOP1P11387 AC015908.1-201ENST00000478739 476 ntBASIC3.46□□□□□ -1.86
TOP1P11387 AC083906.5-201ENST00000503722 328 ntBASIC3.46□□□□□ -1.86
TOP1P11387 AC027338.1-201ENST00000514840 825 ntBASIC3.46□□□□□ -1.86
TOP1P11387 RN7SKP43-201ENST00000516173 320 ntBASIC3.46□□□□□ -1.86
TOP1P11387 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TOP1P11387 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.46□□□□□ -1.86
TOP1P11387 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TOP1P11387 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.46□□□□□ -1.86
TOP1P11387 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.46□□□□□ -1.86
TOP1P11387 AC074051.3-201ENST00000570238 358 ntBASIC3.46□□□□□ -1.86
TOP1P11387 BNIP3P4-201ENST00000604946 565 ntBASIC3.46□□□□□ -1.86
TOP1P11387 AC112503.2-201ENST00000609005 552 ntBASIC3.46□□□□□ -1.86
TOP1P11387 AL360181.4-201ENST00000621752 134 ntBASIC3.46□□□□□ -1.86
TOP1P11387 AC080188.3-201ENST00000624842 748 ntBASIC3.46□□□□□ -1.86
TOP1P11387 MTND2P41-201ENST00000637599 773 ntBASIC3.46□□□□□ -1.86
TOP1P11387 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TOP1P11387 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TOP1P11387 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TOP1P11387 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.45□□□□□ -1.86
TOP1P11387 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
TOP1P11387 RNU6-1005P-201ENST00000384519 107 ntBASIC3.45□□□□□ -1.86
TOP1P11387 RNU6-851P-201ENST00000384565 107 ntBASIC3.45□□□□□ -1.86
TOP1P11387 MIR649-201ENST00000384843 97 ntBASIC3.45□□□□□ -1.86
TOP1P11387 RNU6-821P-201ENST00000390995 107 ntBASIC3.45□□□□□ -1.86
TOP1P11387 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
TOP1P11387 AC233981.1-201ENST00000423224 461 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms