Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC026956.1-201ENST00000558741 396 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 HMGN2P47-201ENST00000559378 272 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 AC055872.1-201ENST00000570978 278 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 MIR548X2-201ENST00000579776 100 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 SNRPCP20-201ENST00000588011 210 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 AL589765.5-201ENST00000596133 515 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 IGKV2OR2-7-201ENST00000604652 304 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 DMD-222ENST00000474231 5209 ntTSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 AC023421.1-201ENST00000590535 1785 ntBASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-1Q9BYR8 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AKAP17BP-201ENST00000431706 2719 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AL353743.1-202ENST00000431724 1695 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AC092692.1-201ENST00000623625 2595 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 DLEU2L-201ENST00000371086 3555 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AC068769.1-201ENST00000474767 2426 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 Y_RNA.75-201ENST00000362927 97 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 Y_RNA.121-201ENST00000363309 113 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 Y_RNA.238-201ENST00000364441 102 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU1-55P-201ENST00000365510 158 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU4-17P-201ENST00000365598 141 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU6-1286P-201ENST00000383871 107 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 SNORD116-14-201ENST00000383894 92 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 SNORD116-17-201ENST00000383929 92 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU6-211P-201ENST00000384047 107 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU1-46P-201ENST00000384425 164 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 SNORD116-15-201ENST00000384445 92 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 SNORD116-20-201ENST00000384529 92 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 SNORD116-19-201ENST00000384729 92 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU2-18P-201ENST00000411224 162 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AL663061.1-201ENST00000416625 580 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 CYCSP52-201ENST00000422857 310 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AC007560.1-201ENST00000426912 237 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 FTLP19-201ENST00000433300 394 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 SEPT7P4-201ENST00000437076 306 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AC005154.2-201ENST00000438110 379 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 FABP5P15-201ENST00000453566 214 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RN7SL815P-201ENST00000470970 290 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AC022795.1-201ENST00000473808 480 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 AL049874.1-201ENST00000489560 388 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 RPL23AP49-201ENST00000492925 468 ntBASIC3.37□□□□□ -1.87
KRTAP3-1Q9BYR8 HMGB3P3-201ENST00000510526 400 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms