Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 CRIP3-201ENST00000274990 800 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SKP184-201ENST00000362348 333 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 SNORD31B-201ENST00000364977 69 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 SPRR2D-204ENST00000368758 782 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU1-28P-201ENST00000383861 164 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU1-27P-201ENST00000383869 164 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU1-1-201ENST00000383925 164 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNVU1-18-201ENST00000384010 164 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 SNORA8.1-201ENST00000384250 140 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU1-2-201ENST00000384278 164 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU1-4-201ENST00000384659 164 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU1-3-201ENST00000384782 164 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU6-1319P-201ENST00000390855 104 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU6-747P-201ENST00000390928 104 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU6-241P-201ENST00000391148 104 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC016739.1-201ENST00000405359 345 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SKP251-201ENST00000410830 314 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU6-177P-201ENST00000411257 104 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC114755.2-201ENST00000413520 361 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC079834.1-201ENST00000414016 421 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC244157.1-201ENST00000415642 163 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC083822.1-201ENST00000438001 201 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC107083.1-201ENST00000439643 279 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 DNM1P24-201ENST00000441091 490 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AL135938.1-201ENST00000443141 297 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 snoU13.4-201ENST00000458916 104 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SL417P-201ENST00000459938 265 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SL610P-201ENST00000463845 291 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 MRPL27-203ENST00000503633 742 ntTSL 3 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC008525.1-201ENST00000508719 676 ntTSL 3 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU2-34P-201ENST00000516534 121 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC013452.1-201ENST00000560630 598 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 MIR3152-201ENST00000579801 74 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC020917.2-201ENST00000587343 401 ntTSL 3 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC008687.3-201ENST00000599209 598 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 U1.40-201ENST00000610976 164 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 MIR6083-201ENST00000612737 106 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 U1.27-201ENST00000615842 164 ntBASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 NOS1-203ENST00000344089 4340 ntTSL 5 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRTAP3-3Q9BYR6 AC092821.3-202ENST00000641304 2767 ntBASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 AC006504.1-201ENST00000562493 3666 ntBASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 LPA-202ENST00000447678 1839 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 MIRLET7E-201ENST00000362102 79 ntBASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 RNA5SP349-201ENST00000363743 109 ntBASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 RNA5SP238-201ENST00000365464 120 ntBASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 SNORD38.2-201ENST00000384470 69 ntBASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 MRPS18BP1-201ENST00000414228 192 ntBASIC4.31□□□□□ -1.72
KRTAP3-3Q9BYR6 AC018638.1-201ENST00000414464 330 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms