Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 RNU6-40P-201ENST00000384254 107 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 RNU2-17P-201ENST00000410290 190 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 Z92545.1-201ENST00000411782 234 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 AC092745.2-202ENST00000411880 369 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 AC114973.1-201ENST00000429057 632 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDCA4Q9BXL8 SETP6-201ENST00000479329 568 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 MTCO3P44-201ENST00000510977 541 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDCA4Q9BXL8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 XIAPP1-201ENST00000603162 600 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 AL513477.2-201ENST00000607858 568 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 AL162574.2-201ENST00000614618 657 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 AL355810.1-201ENST00000614629 552 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 AC009032.1-201ENST00000617574 431 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 CR381653.2-201ENST00000624041 768 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 AC092608.3-201ENST00000625017 386 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.58□□□□□ -2
CDCA4Q9BXL8 CUL1P1-201ENST00000509510 2425 ntBASIC2.58□□□□□ -2
CDCA4Q9BXL8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CDCA4Q9BXL8 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDCA4Q9BXL8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 RNA5SP374-201ENST00000362939 125 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 RNU6-1249P-201ENST00000363237 111 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDCA4Q9BXL8 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 MIR128-1-201ENST00000384921 82 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 SNORA48.2-201ENST00000390926 124 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 MTND4P13-201ENST00000402078 1023 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AL024507.1-201ENST00000412741 274 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 SSXP9-201ENST00000417503 292 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 UBE2V1P5-201ENST00000440070 405 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 MRPL50P4-201ENST00000446432 475 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AL671855.1-201ENST00000446875 1203 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AC015724.1-201ENST00000478577 156 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 RNU6-551P-201ENST00000516661 103 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 SCARNA13-201ENST00000516672 275 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AP002404.1-201ENST00000532005 451 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 AL133271.1-201ENST00000538229 291 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 AC093014.1-201ENST00000548926 724 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AC012414.2-201ENST00000559474 187 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AADACP1-206ENST00000561502 1193 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 MIR4325-201ENST00000583049 90 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 AC005046.1-201ENST00000608515 625 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AC131902.3-201ENST00000611767 581 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AL138880.2-201ENST00000616214 239 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 AC024595.1-201ENST00000623088 387 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 AC026422.1-201ENST00000623961 452 ntBASIC2.57□□□□□ -2
CDCA4Q9BXL8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDCA4Q9BXL8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDCA4Q9BXL8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CDCA4Q9BXL8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
CDCA4Q9BXL8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CDCA4Q9BXL8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
CDCA4Q9BXL8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CDCA4Q9BXL8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CDCA4Q9BXL8 SNORA9.2-201ENST00000365361 133 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 RNU6-1151P-201ENST00000384684 107 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.56□□□□□ -2
CDCA4Q9BXL8 RNU6-272P-201ENST00000411028 104 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 AL513175.2-201ENST00000422071 443 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 AC091390.3-201ENST00000426478 338 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.56□□□□□ -2
CDCA4Q9BXL8 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.56□□□□□ -2
CDCA4Q9BXL8 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.56□□□□□ -2
CDCA4Q9BXL8 AP000705.1-201ENST00000454567 350 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 AL590639.1-201ENST00000456484 337 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.56□□□□□ -2
CDCA4Q9BXL8 RPS29P12-201ENST00000460178 152 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDCA4Q9BXL8 AC090525.1-201ENST00000479116 478 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.56□□□□□ -2
CDCA4Q9BXL8 SNORA31.8-201ENST00000516327 108 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 PSMA2P1-201ENST00000526365 646 ntBASIC2.56□□□□□ -2
CDCA4Q9BXL8 HPRT1P3-201ENST00000539521 576 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms