Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC020634.1-201ENST00000608701 549 ntBASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 AL391813.2-201ENST00000609113 322 ntBASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 AC093788.1-201ENST00000609356 927 ntBASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 AL121757.2-201ENST00000611223 313 ntBASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 MIR6780A-201ENST00000615089 68 ntBASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 AC123768.4-201ENST00000616244 701 ntBASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 MIR6853-201ENST00000619642 74 ntBASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 AC130650.2-201ENST00000618736 2403 ntBASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.2□□□□□ -1.58
CHAMP1Q96JM3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 RNU5E-1-201ENST00000362477 120 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 RNA5SP391-201ENST00000363456 119 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 RNU1-39P-201ENST00000383897 165 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 RNU1-44P-201ENST00000384453 163 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AL024474.1-201ENST00000404655 591 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 RNA5SP113-201ENST00000410486 84 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 MTCO2P5-201ENST00000422621 426 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 PDSS1P1-201ENST00000422953 1114 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AL031736.2-201ENST00000426573 787 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 NRBF2P3-201ENST00000432731 865 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 NUTF2P7-201ENST00000453086 375 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 snoU13.22-201ENST00000459428 104 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AL136126.1-201ENST00000473603 402 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AC087879.1-201ENST00000474343 374 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 RPL30P11-201ENST00000495304 339 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 RN7SKP122-201ENST00000515923 296 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 Vault.3-201ENST00000516676 95 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AC005261.5-201ENST00000596280 355 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AC011468.4-201ENST00000603942 409 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AL391358.1-201ENST00000605342 190 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AL161734.1-201ENST00000609720 557 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AC007742.2-201ENST00000618226 398 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 MIR7703-201ENST00000620784 77 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AC010338.1-201ENST00000621823 717 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 FER-210ENST00000628534 558 ntTSL 5 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AC055839.1-201ENST00000634467 498 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 AC010149.2-201ENST00000637608 315 ntBASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.19□□□□□ -1.58
CHAMP1Q96JM3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 RNU6-853P-201ENST00000364306 107 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 Y_RNA.481-201ENST00000384373 102 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 Y_RNA.509-201ENST00000384506 99 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 BTBD10P2-201ENST00000404779 676 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC127391.1-201ENST00000411737 98 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 SNRPFP1-201ENST00000414761 252 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AL139095.3-201ENST00000419672 1203 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC234779.1-201ENST00000425910 285 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 OR51AB1P-201ENST00000429046 620 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 HLA-N-201ENST00000437516 135 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 RPL23AP93-201ENST00000440847 484 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 HSPE1P28-201ENST00000443139 211 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 SNORA84-201ENST00000459229 133 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 RPL39P36-201ENST00000490784 156 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC023194.1-201ENST00000493084 308 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC114786.4-201ENST00000508771 728 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 MTND3P22-201ENST00000510932 243 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC025465.4-201ENST00000513422 638 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC093677.1-201ENST00000514414 678 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms