Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC125611.2-201ENST00000551907 647 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 AC136618.2-201ENST00000575091 400 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 MIR3609-201ENST00000582661 80 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 SDR42E1P1-201ENST00000611327 477 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 AL161616.1-201ENST00000611867 286 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 AL050303.3-201ENST00000613704 284 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 AC008443.7-201ENST00000622195 246 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 AC027309.3-201ENST00000623419 351 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 PCMTD1P7-201ENST00000634506 357 ntBASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LINC01561Q8N1V8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC011460.1-201ENST00000636268 1834 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 FAM35BP-202ENST00000497389 3337 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RNU1-18P-201ENST00000363062 164 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RNU5E-8P-201ENST00000363502 116 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 Y_RNA.548-201ENST00000384656 105 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RNU1-101P-201ENST00000391171 127 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RPL21P17-201ENST00000397467 475 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AL354719.1-201ENST00000406535 843 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 MIR1305-201ENST00000408300 86 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 MTCO1P17-201ENST00000411522 491 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RPL22P18-201ENST00000417197 377 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC245054.1-201ENST00000420944 258 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 COX6CP17-201ENST00000421389 185 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RPL23AP1-201ENST00000428990 471 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RPS29P17-201ENST00000430795 166 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RPS3AP54-201ENST00000435535 734 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC073264.2-201ENST00000448886 166 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RPL31P60-201ENST00000478450 367 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RPS4XP14-201ENST00000493072 781 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC106872.3-201ENST00000495104 446 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 CEACAMP10-202ENST00000495431 496 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC114967.1-201ENST00000504890 259 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC022447.3-201ENST00000506865 495 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC091516.1-201ENST00000549191 703 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC061975.8-201ENST00000587058 721 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC093227.2-201ENST00000589357 285 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 RPL12P25-202ENST00000598100 674 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC019193.2-201ENST00000610012 634 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC091564.4-201ENST00000533934 2194 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 AC012321.1-201ENST00000561622 1588 ntBASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01561Q8N1V8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 AC010680.1-201ENST00000590024 3590 ntBASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 AL672167.1-206ENST00000356293 943 ntBASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 RNU6-289P-201ENST00000364093 107 ntBASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 MIR514A1-201ENST00000385133 98 ntBASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 EI24P2-201ENST00000397776 1076 ntBASIC2.69□□□□□ -1.98
LINC01561Q8N1V8 AL583835.1-201ENST00000399570 407 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms